CF503817

Overview
NameCF503817
Unique NameCF503817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length407
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7217 contig Csv1_Contig7217:536..942. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON_STRMU (Aconitate hydratase OS=Streptococcus mutans GN=acn PE=3 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 1.612e-45
Identity = 88/134 (65.67%), Postives = 108/134 (80.60%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWP 402
            E GL V   VKTSLAPGS VVT YL +SGLQ YL++ GF++VGYGCTTCIGNSGDL   VA A+ + D++ +AVLSGNRNFEGRV+PL +AN+LASPPLVVAYALAGT +ID   +P+G  K+G++VY +DI P
Sbjct:  454 ERGLSVAKTVKTSLAPGSKVVTAYLRKSGLQPYLDKLGFNLVGYGCTTCIGNSGDLVPEVAKAVQEKDLLVSAVLSGNRNFEGRVNPLVKANFLASPPLVVAYALAGTTNIDLTSKPLGYDKNGQAVYLEDIMP 587          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: IREB2_RAT (Iron-responsive element-binding protein 2 OS=Rattus norvegicus GN=Ireb2 PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 2.750e-45
Identity = 81/135 (60.00%), Postives = 106/135 (78.52%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL+VKP+++TSL+PGSG+VT YL  SG+  YL++ GF IVGYGC+TC+GN+  L E++ +A+   D+V   VLSGN+NFEGR+    RANYLASPPLVVAYA+AGTV+IDF  EP+GT   GK++Y  DIWP+
Sbjct:  533 ETGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFEIVGYGCSTCVGNTAPLSEAILNAVKQGDLVTCGVLSGNKNFEGRLCDCVRANYLASPPLVVAYAIAGTVNIDFQTEPLGTDSTGKNIYLHDIWPS 667          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: IREB2_PIG (Iron-responsive element-binding protein 2 OS=Sus scrofa GN=IREB2 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.690e-45
Identity = 82/135 (60.74%), Postives = 106/135 (78.52%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL+VKP+++TSL+PGSG+VT YL  SG+  YL++ GF IVGYGC+TC+GN+  L E+V +A+   D+V   VLSGN+NFEGR+    RANYLASPPLVVAYA+AGTV+IDF  EP+GT   GK++Y  DIWP+
Sbjct:  534 EAGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFEIVGYGCSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKNFEGRLCDCVRANYLASPPLVVAYAIAGTVNIDFRTEPLGTDPTGKNIYLHDIWPS 668          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: IREB2_MOUSE (Iron-responsive element-binding protein 2 OS=Mus musculus GN=Ireb2 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 8.000e-45
Identity = 81/135 (60.00%), Postives = 106/135 (78.52%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E+GL+VKP+++TSL+PGSG+VT YL  SG+  YL++ GF IVGYGC+TC+GN+  L E+V +A+   D+V   VLSGN++FEGR+    RANYLASPPLVVAYA+AGTV+IDF  EP+GT   GK +Y  DIWP+
Sbjct:  533 EIGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFDIVGYGCSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKHFEGRLCDCDRANYLASPPLVVAYAIAGTVNIDFQTEPLGTDSTGKEIYLHDIWPS 667          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: IREB2_HUMAN (Iron-responsive element-binding protein 2 OS=Homo sapiens GN=IREB2 PE=1 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 8.000e-45
Identity = 80/135 (59.26%), Postives = 106/135 (78.52%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL+VKP+++TSL+PGSG+VT YL  SG+  YL++ GF IVGYGC+TC+GN+  L ++V +A+   D+V   +LSGN+NFEGR+    RANYLASPPLVVAYA+AGTV+IDF  EP+GT   GK++Y  DIWP+
Sbjct:  533 EAGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFEIVGYGCSTCVGNTAPLSDAVLNAVKQGDLVTCGILSGNKNFEGRLCDCVRANYLASPPLVVAYAIAGTVNIDFQTEPLGTDPTGKNIYLHDIWPS 667          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON_RICPR (Aconitate hydratase OS=Rickettsia prowazekii GN=acnA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 8.000e-45
Identity = 87/135 (64.44%), Postives = 106/135 (78.52%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL VKPWVKTSLAPGS VVT+YL  SGL KYL+  GF++VGYGCTTCIGNSG L+  + + I  N +V A+VLSGNRNFEGR++PLT+A+YLASP LVVAYAL+GT++ID    PIG      ++Y KDIWP+
Sbjct:  447 EHGLNVKPWVKTSLAPGSKVVTEYLKLSGLDKYLDALGFNLVGYGCTTCIGNSGSLNPEIENTINKNRLVVASVLSGNRNFEGRINPLTKASYLASPILVVAYALSGTLNIDLTNTPIGA-----NIYLKDIWPS 576          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON_RICCN (Aconitate hydratase OS=Rickettsia conorii GN=acnA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 8.000e-45
Identity = 86/135 (63.70%), Postives = 107/135 (79.26%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL+VKPWVKTSLAPGS VVT+YL  SGL KYL+E GF++VGYGCTTCIGNSG L+  +   I  N +V A+VLSGNRNFEGR++PLT+A+YL SP LVVAYAL+GT++ID    PI     G+++Y KD+WP+
Sbjct:  447 EHGLKVKPWVKTSLAPGSKVVTEYLKLSGLDKYLDELGFNLVGYGCTTCIGNSGPLNPEIEETINKNGLVVASVLSGNRNFEGRINPLTKASYLGSPILVVAYALSGTLNIDLTNMPI-----GENIYLKDLWPS 576          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON_RICTY (Aconitate hydratase OS=Rickettsia typhi GN=acnA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.365e-44
Identity = 87/135 (64.44%), Postives = 106/135 (78.52%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL VKPWVKTSLAPGS VVT+YL  SGL KYL+  GF++VGYGCTTCIGNSG L+  + + I  N +V A+VLSGNRNFEGR++PLT+A+YLASP LVVAYAL+GT++ID    PIG      ++Y KDIWP+
Sbjct:  447 EHGLNVKPWVKTSLAPGSKVVTEYLKISGLDKYLDALGFNLVGYGCTTCIGNSGSLNPEIENTINKNRLVVASVLSGNRNFEGRINPLTKASYLASPILVVAYALSGTLNIDLTTTPIGA-----NIYLKDIWPS 576          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON1_ECOLI (Aconitate hydratase 1 OS=Escherichia coli (strain K12) GN=acnA PE=1 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 1.782e-44
Identity = 83/134 (61.94%), Postives = 104/134 (77.61%), Query Frame = 1
Query:    4 LGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            LGL+ +PWVK SLAPGS VV+ YL ++ L  YL+E GF++VGYGCTTCIGNSG L + + +AI  +D+   AVLSGNRNFEGR+HPL + N+LASPPLVVAYALAG ++I+   EPIG  + G  VY KDIWP+
Sbjct:  457 LGLKRQPWVKASLAPGSKVVSDYLAKAKLTPYLDELGFNLVGYGCTTCIGNSGPLPDPIETAIKKSDLTVGAVLSGNRNFEGRIHPLVKTNWLASPPLVVAYALAGNMNINLASEPIGHDRKGDPVYLKDIWPS 590          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACOC_CAEEL (Probable cytoplasmic aconitate hydratase OS=Caenorhabditis elegans GN=aco-1 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.328e-44
Identity = 86/135 (63.70%), Postives = 102/135 (75.56%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            ELGL V+P+VKTSL+PGSGVVTKYL  SGL  YL + GF+I GYGC TCIGNSG LDE V  AI +N++V A VLSGNRNFEGR+HP  RANYLASPPL V Y++ G V++D +   +  T DGK +   DIWPT
Sbjct:  457 ELGLNVQPYVKTSLSPGSGVVTKYLEASGLLPYLEKIGFNIAGYGCMTCIGNSGPLDEPVTKAIEENNLVVAGVLSGNRNFEGRIHPHVRANYLASPPLAVLYSIIGNVNVDIN-GVLAVTPDGKEIRLADIWPT 590          
The following BLAST results are available for this feature:
BLAST of CF503817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ACON_STRMU1.612e-4565.67Aconitate hydratase OS=Streptococcus mutans GN=acn... [more]
IREB2_RAT2.750e-4560.00Iron-responsive element-binding protein 2 OS=Rattu... [more]
IREB2_PIG4.690e-4560.74Iron-responsive element-binding protein 2 OS=Sus s... [more]
IREB2_MOUSE8.000e-4560.00Iron-responsive element-binding protein 2 OS=Mus m... [more]
IREB2_HUMAN8.000e-4559.26Iron-responsive element-binding protein 2 OS=Homo ... [more]
ACON_RICPR8.000e-4564.44Aconitate hydratase OS=Rickettsia prowazekii GN=ac... [more]
ACON_RICCN8.000e-4563.70Aconitate hydratase OS=Rickettsia conorii GN=acnA ... [more]
ACON_RICTY1.365e-4464.44Aconitate hydratase OS=Rickettsia typhi GN=acnA PE... [more]
ACON1_ECOLI1.782e-4461.94Aconitate hydratase 1 OS=Escherichia coli (strain ... [more]
ACOC_CAEEL2.328e-4463.70Probable cytoplasmic aconitate hydratase OS=Caenor... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-304 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503817 ID=CF503817; Name=CF503817; organism=Citrus sinensis; type=EST; length=407bp
GAACTTGGTTTGCAGGTCAAGCCATGGGTTAAAACAAGTCTTGCCCCAGG
CTCAGGAGTTGTTACTAAATATTTACTCCAGAGTGGACTGCAAAAATATT
TAAATGAGCAAGGATTCCATATTGTTGGATATGGATGCACAACATGTATT
GGAAATTCAGGGGATCTGGATGAATCTGTTGCATCTGCTATTACTGACAA
TGACATTGTGGCAGCAGCTGTGCTTTCTGGAAACAGGAATTTTGAGGGTC
GTGTTCATCCCTTGACAAGAGCTAATTACCTTGCTTCTCCTCCTTTAGTT
GTGGCATATGCCCTTGCTGGCACGGTTGACATAGATTTTGATAAGGAGCC
GATTGGAACAACCAAGGATGGTAAGAGTGTTTATTTCAAGGATATCTGGC
CGACTAC
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