CF503824

Overview
NameCF503824
Unique NameCF503824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length303
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503824 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.518e-11
Identity = 33/91 (36.26%), Postives = 55/91 (60.44%), Query Frame = 2
Query:    5 SGWIADGIGRRRAFQLCALPMIIGASMSAITKNLWGMLLGRLFVGTGMGIGPAVAALYVSEVSPAYVRGAYGSSTQIAACLGILVALFVGL 277
            SG IA+ IGR+ +  + A+P IIG    +  K+   + +GRL  G G+GI      +Y++E++P  +RG  GS  Q++  +GI++A  +GL
Sbjct:  105 SGQIAEYIGRKGSLMIAAIPNIIGWLCISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQNMRGGLGSVNQLSVTIGIMLAYLLGL 195          
The following BLAST results are available for this feature:
BLAST of CF503824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ERDL6_ARATH7.518e-1136.26Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-311 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503824 ID=CF503824; Name=CF503824; organism=Citrus sinensis; type=EST; length=303bp
GTTCAGTGGTTGGATTGCAGATGGTATTGGACGGCGCAGGGCATTCCAGC
TGTGCGCTTTACCAATGATAATTGGGGCTTCAATGAGTGCTATAACGAAA
AATCTCTGGGGAATGCTTCTTGGAAGGTTATTTGTTGGGACTGGAATGGG
TATTGGGCCTGCTGTTGCAGCTCTCTATGTGTCAGAGGTTTCACCAGCTT
ATGTAAGGGGTGCTTATGGCAGCTCTACCCAGATCGCAGCATGTCTTGGA
ATTTTGGTGGCGTTATTTGTTGGACTCCCAGCTAAGGAAATTTTGGGTTG
GTG
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