CF503857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB7_MAIZE (Tubulin beta-7 chain OS=Zea mays GN=TUBB7 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 2.485e-54 Identity = 97/107 (90.65%), Postives = 102/107 (95.33%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREILHIQGGQCGNQIG+KFWEVICDEHG+D TGKY GD DLQLERINVYYNEASGGR+VPRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDS--DLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB5_ORYSJ (Tubulin beta-5 chain OS=Oryza sativa subsp. japonica GN=TUBB5 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 2.485e-54 Identity = 97/107 (90.65%), Postives = 102/107 (95.33%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREILHIQGGQCGNQIG+KFWEVICDEHG+D TGKY GD DLQLERINVYYNEASGGR+VPRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDS--DLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB1_ELEIN (Tubulin beta-1 chain OS=Eleusine indica GN=TUBB1 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 2.485e-54 Identity = 97/107 (90.65%), Postives = 102/107 (95.33%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREILHIQGGQCGNQIG+KFWEVICDEHG+D TGKY GD DLQLERINVYYNEASGGR+VPRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDS--DLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB_CICAR (Tubulin beta chain OS=Cicer arietinum GN=TUBB PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 3.245e-54 Identity = 95/107 (88.79%), Postives = 101/107 (94.39%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREILH+QGGQCGNQIGSKFWEVICDEHG+D TGKY +G D QLERINVYYNEASGGRYVPRAVLMDLEPGTM+SIRSGP+G+IFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGIDQTGKYISEGGSDTQLERINVYYNEASGGRYVPRAVLMDLEPGTMESIRSGPFGKIFRPDNFVFGQSGAGNNWAKGH 107
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB3_ELEIN (Tubulin beta-3 chain OS=Eleusine indica GN=TUBB3 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 3.245e-54 Identity = 97/107 (90.65%), Postives = 101/107 (94.39%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREILHIQGGQCGNQIG+KFWEVICDEHG+D TGKY GD DLQLERINVYYNEA GGR+VPRAVLMDLEPGTMDS+RSGPYGQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDS--DLQLERINVYYNEAGGGRFVPRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB4_WHEAT (Tubulin beta-4 chain OS=Triticum aestivum GN=TUBB4 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 5.535e-54 Identity = 96/107 (89.72%), Postives = 102/107 (95.33%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREILHIQGGQCGNQIG+KFWEVICDEHG+D TG+Y GD DLQLERINVYYNEASGGR+VPRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGRYAGDS--DLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB6_ARATH (Tubulin beta-6 chain OS=Arabidopsis thaliana GN=TUBB6 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 9.442e-54 Identity = 94/107 (87.85%), Postives = 102/107 (95.33%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREILHIQGGQCGNQIGSKFWEV+CDEHG+DPTG+Y G+ DLQLER+NVYYNEAS GRYVPRA+LMDLEPGTMDS+R+GPYGQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNS--DLQLERVNVYYNEASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB1_PEA (Tubulin beta-1 chain OS=Pisum sativum GN=TUBB1 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.233e-53 Identity = 95/107 (88.79%), Postives = 102/107 (95.33%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MR+ILHIQGGQCGNQIG+KFWEV+C EHG+DPTG+Y GD DLQLERI+VYYNEASGGR+VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MRQILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDS--DLQLERIDVYYNEASGGRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB6_ORYSJ (Tubulin beta-6 chain OS=Oryza sativa subsp. japonica GN=TUBB6 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 1.610e-53 Identity = 94/107 (87.85%), Postives = 101/107 (94.39%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREILHIQGGQCGNQIGSKFWEV+CDEHG+DPTG+Y G DLQLER+NVYYNEAS GR+VPRAVLMDLEPGTMDS+R+GPYGQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAG--TSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB6_MAIZE (Tubulin beta-6 chain OS=Zea mays GN=TUBB6 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 2.747e-53 Identity = 93/107 (86.92%), Postives = 102/107 (95.33%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREILHIQGGQCGNQIG+KFWEV+CDEHG+DPTG+Y G+ DLQLER+NVYYNEAS GR+VPRAVLMDLEPGTMDS+R+GPYGQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNS--DLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGH 105 The following BLAST results are available for this feature:
BLAST of CF503857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 402
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503857 ID=CF503857; Name=CF503857; organism=Citrus sinensis; type=EST; length=328bpback to top |