CF503857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB1_ECHMU (Tubulin beta-1 chain OS=Echinococcus multilocularis GN=TUB-1 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 3.358e-51 Identity = 91/107 (85.05%), Postives = 99/107 (92.52%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREI+HIQ GQCGNQIGSKFWEVI DEHGVDPTG Y GD DLQLERINVYY+EASGG+YVPR VL+DLEPGTMDS+R+GP+GQ+FRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGVDPTGSYHGDS--DLQLERINVYYSEASGGKYVPRCVLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB1_DROME (Tubulin beta-1 chain OS=Drosophila melanogaster GN=betaTub56D PE=1 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 3.358e-51 Identity = 91/107 (85.05%), Postives = 99/107 (92.52%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREI+HIQ GQCGNQIG+KFWE+I DEHG+D TG Y GD DLQLERINVYYNEASGG+YVPRAVL+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDATGAYHGDS--DLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB1_CHICK (Tubulin beta-1 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 3.358e-51 Identity = 90/107 (84.11%), Postives = 99/107 (92.52%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREI+HIQ GQCGNQIG+KFWEVI DEHG+DPTG Y GD DLQLERINVYYNEA+G +YVPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDS--DLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB_GIALA (Tubulin beta chain OS=Giardia lamblia PE=2 SV=3) HSP 1 Score: 199.519 bits (506), Expect = 4.386e-51 Identity = 89/107 (83.18%), Postives = 102/107 (95.33%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREI+HIQ GQCGNQIG+KFWEVI DEHGVDP+G+YRGD +LQ+ERINVY+NEA+GGRYVPRA+L+DLEPGTMDS+R+GP+GQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGVDPSGEYRGDS--ELQIERINVYFNEAAGGRYVPRAILVDLEPGTMDSVRAGPFGQIFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB4_CAEEL (Tubulin beta-4 chain OS=Caenorhabditis elegans GN=tbb-4 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 4.386e-51 Identity = 90/107 (84.11%), Postives = 99/107 (92.52%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREI+HIQ GQCGNQIG+KFWEVI DEHG+DPTG Y GD DLQLERINVYYNEASGG+YVPRA L+DLEPGTMDS+R+GP+GQ+FRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDS--DLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB2_SOYBN (Tubulin beta-2 chain OS=Glycine max GN=TUBB2 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 4.386e-51 Identity = 92/107 (85.98%), Postives = 99/107 (92.52%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE LHIQGGQCGNQIG+KFWEV+C EHG+DPTG+Y GD +LQLERINVYYNEAS GR+V RAVLMDLEPGTMDS+RSGPYGQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 MRESLHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDS--ELQLERINVYYNEASCGRFVRRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB1_ANEPH (Tubulin beta-1 chain OS=Anemia phyllitidis GN=TUBB1 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 4.386e-51 Identity = 91/106 (85.85%), Postives = 98/106 (92.45%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG 323 MREILH+QGGQCGNQIG+KFWEV+C EHG+DPTG YRGD + QLER+NVYYNEAS GRYVPRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKG Sbjct: 1 MREILHVQGGQCGNQIGAKFWEVVCTEHGIDPTGTYRGDS--ETQLERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGHYGQIFRPDNFVFGQSGAGNNWAKG 104
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB_TOXGO (Tubulin beta chain OS=Toxoplasma gondii PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 5.728e-51 Identity = 88/107 (82.24%), Postives = 101/107 (94.39%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREI+H+QGGQCGNQIG+KFWEVI DEHG+DPTG Y GD DLQLERINV+YNEA+GGR+VPRA+LMDLEPGTMDS+R+GP+GQ+FRPDNFVFGQ+GAGNNWAKGH Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGIDPTGTYCGDS--DLQLERINVFYNEATGGRFVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB_EIMTE (Tubulin beta chain OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 5.728e-51 Identity = 89/107 (83.18%), Postives = 101/107 (94.39%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREI+H+QGGQCGNQIG+KFWEVI DEHG+ PTG Y+GD DLQLERI+V+YNEA+GGRYVPRAVLMDLEPGTMDS+RSGP+GQ+FRPDNFVFGQ+GAGNNWAKGH Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGIAPTGTYKGDS--DLQLERISVFYNEATGGRYVPRAVLMDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB5_ECTVR (Tubulin beta-5 chain OS=Ectocarpus variabilis GN=TUBB5 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 5.728e-51 Identity = 88/107 (82.24%), Postives = 99/107 (92.52%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREI+H+Q GQCGNQIGSKFWEVI DEHG+DPTG Y GD DLQLERIN Y+NEA+GGRYVPRA+LMDLEPGTMDS+R+GP+GQ+FRPDNFVFGQ+GAGNNWAKGH Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDS--DLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGH 105 The following BLAST results are available for this feature:
BLAST of CF503857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 402
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF503857 ID=CF503857; Name=CF503857; organism=Citrus sinensis; type=EST; length=328bpback to top |