CF503859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: YBT1_YEAST (ATP-dependent bile acid permease OS=Saccharomyces cerevisiae GN=YBT1 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.946e-16 Identity = 43/119 (36.13%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDML-SNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 ++P+ QHF+ET+ G TTIR+F E RF+ N+ +D ++P F++ A WL FR+DM+ S + F L L +I +D +AG+++TY ++ L+ L ++E + SVER+ Sbjct: 1237 RSPIYQHFSETLVGVTTIRAFGDEGRFMQENLHKIDENNKPFFYLWVANRWLAFRIDMIGSLVIFGAGLFILFNINN--LDSGMAGISLTYAISFTEGALWLVRLYSEVEMNMNSVERV 1353
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: ABCC8_DICDI (ABC transporter C family member 8 OS=Dictyostelium discoideum GN=abcC8 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.498e-14 Identity = 35/118 (29.66%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 ++P+ HF+ET++G TTIR+F +RF+ N L+D + + ++ WL RL+ L + ++++ + + + I+ AGL +TY L + ++ ++C +EN ++S+ERI Sbjct: 1200 RSPIYAHFSETLAGVTTIRAFKDVARFVTENERLLDENQKCYYINISSNRWLAIRLEFLGACLVSCAVLYTV-LARSRIEAGTAGLVITYALAITGNMNWMVRMSCDLENSVVSIERI 1316
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: VMR1_YEAST (ABC transporter ATP-binding protein/permease VMR1 OS=Saccharomyces cerevisiae GN=VMR1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.261e-14 Identity = 43/119 (36.13%), Postives = 69/119 (57.98%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDML-SNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 K+P+ QHF+ET+ G TIR+F E RFI NM +D +R F+++ ++W FR+DM+ + I A L++I ID +AG+++TY + + L+ L E + SVER+ Sbjct: 1174 KSPIFQHFSETLVGVCTIRAFGDERRFILENMNKIDQNNRAFFYLSVTVKWFSFRVDMIGAFIVLASGSFILLNIAN--IDSGLAGISLTYAILFTDGALWLVRLYSTFEMNMNSVERL 1290
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: MRP5_HUMAN (Multidrug resistance-associated protein 5 OS=Homo sapiens GN=ABCC5 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.115e-13 Identity = 40/118 (33.90%), Postives = 62/118 (52.54%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 ++P + H ++ G TI ++++ F+ EL+D P F AM WL RLD++S I + +I + G I PA AGLA++Y + L L + LA + E + SVERI Sbjct: 1047 QSPFLSHITSSIQGLATIHAYNKGQEFLHRYQELLDDNQAPFFLFTCAMRWLAVRLDLIS-IALITTTGLMIVLMHGQIPPAYAGLAISYAVQLTGLFQFTVRLASETEARFTSVERI 1163
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: ABCCA_DICDI (ABC transporter C family member 10 OS=Dictyostelium discoideum GN=abcC10 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.153e-13 Identity = 42/118 (35.59%), Postives = 65/118 (55.08%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 ++P+ HF+ET++G +IR++ ++ I N + +D + + A WLG RLD L+N+ F+ +F I+I K I PA GLA+ Y L+L A E K+ SVERI Sbjct: 908 RSPIFNHFSETLNGVVSIRAYKKQQENILINQKRLDDNNNCYLTLQAMNRWLGLRLDFLANLITFFACIF-ITIDKDTISPANVGLALGYALSLTGNLNYAALQAADTETKMNSVERI 1024
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: MRP5_RAT (Multidrug resistance-associated protein 5 OS=Rattus norvegicus GN=Abcc5 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.050e-12 Identity = 39/118 (33.05%), Postives = 61/118 (51.69%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 ++P + H ++ G TI ++++ F+ EL+D P F AM WL RLD++S I + +I + G I A AGLA++Y + L L + LA + E + SVERI Sbjct: 1046 QSPFLSHITSSIQGLATIHAYNKRQEFLHRYQELLDDNQAPFFLFTCAMRWLAVRLDLIS-IALITTTGLMIVLMHGQIPSAYAGLAISYAVQLTGLFQFTVRLASETEARFTSVERI 1162
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: ABCCC_DICDI (ABC transporter C family member 12 OS=Dictyostelium discoideum GN=abcC12 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.050e-12 Identity = 39/118 (33.05%), Postives = 66/118 (55.93%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 ++P+ HF+ET++G +IR++ ++ I N + +D + + A WLG RLD L N+ FS +F I++ K I P+ GL ++Y L++ + + A E K+ SVERI Sbjct: 902 RSPIFNHFSETLNGVVSIRAYKKQQENILKNQKRLDDNNNCYLTLQAMNRWLGLRLDFLGNLIVFFSCIF-ITLKKDTISPSDVGLVLSYALSITSNLNQGVLQAADTETKMNSVERI 1018
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: MRP1_CHICK (Multidrug resistance-associated protein 1 OS=Gallus gallus GN=ABCC1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.338e-12 Identity = 35/118 (29.66%), Postives = 64/118 (54.24%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 ++P+ HF ET+ G + IR+F+++ RFI N +D + + A WL RL+ + N F+ +F + I + + P + GL+V+Y L + L+ + +E I++VER+ Sbjct: 1142 RSPVYSHFNETLLGVSVIRAFEEQKRFIKQNDMKVDENQKAYYPSIVANRWLAVRLEFVGNCIVLFAALFAV-IARNKLSPGLIGLSVSYSLQITAYLNWLVRMTSDLETNIVAVERV 1258
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: ABCC3_DICDI (ABC transporter C family member 3 OS=Dictyostelium discoideum GN=abcC3 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.054e-12 Identity = 40/118 (33.90%), Postives = 67/118 (56.78%), Query Frame = 3 Query: 3 KAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 ++P+ HF+ET+ G +IR++ ++ I TN +D ++ + A +WLG RLD+L+N+ F+ +F I+I + I A GL+++Y L+L A E K+ SVERI Sbjct: 917 RSPIFSHFSETLGGVVSIRAYRKKEENILTNQFRLDNNNKCYLTLQAMNQWLGLRLDLLANLVTFFACLF-ITIDRDTISAANVGLSLSYALSLTGNLNRATLQAADTETKMNSVERI 1033
BLAST of CF503859 vs. ExPASy Swiss-Prot
Match: MRP7_HUMAN (Multidrug resistance-associated protein 7 OS=Homo sapiens GN=ABCC10 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.209e-12 Identity = 36/118 (30.51%), Postives = 68/118 (57.63%), Query Frame = 3 Query: 6 APLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDML-SNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 356 +PL H A+T++G + +R+ RF + N+ L++ R F +A M+WL RL ++ + + A + + L+ +G +P + GL+++Y L+L L + L+ Q E ++SVER+ Sbjct: 1101 SPLYSHLADTLAGLSVLRATGATYRFEEENLRLLELNQRCQFATSATMQWLDIRLQLMGAAVVSAIAGIALVQHQQGLANPGLVGLSLSYALSLTGLLSGLVSSFTQTEAMLVSVERL 1218 The following BLAST results are available for this feature:
BLAST of CF503859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503859 ID=CF503859; Name=CF503859; organism=Citrus sinensis; type=EST; length=361bpback to top |