CF503868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503868 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.331e-12 Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = 2 Query: 29 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 268 ++ + G L W + L AF + +K+I +R TGRSRGFGFVTF+ + ++ A++ MNG E++GR + +N A R Sbjct: 6 YRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQSR 85
BLAST of CF503868 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.044e-12 Identity = 31/83 (37.35%), Postives = 51/83 (61.45%), Query Frame = 2 Query: 20 DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 268 D ++ + G L W + L AF ++ +K+I +R TGRSRGFGFVTF+ + ++ A++ MNG +++GR + +N A R Sbjct: 5 DVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQSR 87
BLAST of CF503868 vs. ExPASy Swiss-Prot
Match: RT19_ARATH (40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana GN=RPS19 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.511e-11 Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 32 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETKTENS 316 K+Y G L G L+DAF G+ A+V+ + TGRSRG+GFV F + + SA+ AMNG E+ G + +N+A + P LP + + E + Sbjct: 32 KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDW--PSLPLSLDESIEEA 124
BLAST of CF503868 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.973e-11 Identity = 31/80 (38.75%), Postives = 48/80 (60.00%), Query Frame = 2 Query: 29 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 268 ++ + G L W L F ++ +K+I +R TGRSRGFGFVTF+ + ++ A+D MNG E++GR + +N A R Sbjct: 6 YRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQSR 85
BLAST of CF503868 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.396e-11 Identity = 29/80 (36.25%), Postives = 50/80 (62.50%), Query Frame = 2 Query: 29 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 268 ++ + G L W + L+ F ++ +K+I +R +GRSRGFGFVTF+ + ++ A++ MNG E++GR + +N A R Sbjct: 6 YRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSR 85
BLAST of CF503868 vs. ExPASy Swiss-Prot
Match: YKX5_SCHPO (Uncharacterized RNA-binding protein C328.05 OS=Schizosaccharomyces pombe GN=SPAC328.05 PE=2 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 5.741e-11 Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = 2 Query: 35 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP-PVLP 286 IY GNL W + + L D F ++ A++ +E TGRS+GFG V FE D S+++ +NG GRPL+L+ A+ P P +P Sbjct: 316 IYVGNLPWATSDRNLLDLFTDIGSVIRARIAYEP-TGRSKGFGVVQFENENDAASSIEKLNGYRYGGRPLQLSYAHYATPLPAVP 399 The following BLAST results are available for this feature:
BLAST of CF503868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF503868 ID=CF503868; Name=CF503868; organism=Citrus sinensis; type=EST; length=412bpback to top |