CF503928

Overview
NameCF503928
Unique NameCF503928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503928 vs. ExPASy Swiss-Prot
Match: CSLC7_ORYSJ (Probable xyloglucan glycosyltransferase 7 OS=Oryza sativa subsp. japonica GN=CSLC7 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.596e-79
Identity = 137/175 (78.29%), Postives = 148/175 (84.57%), Query Frame = 2
Query:  113 GVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIIKSKIPTWKKGNXXXXXXXXXXXXXPFYSFTLFCIILPLTMFIPEAELPVWVICYVPVFMSFLNILPAPKSFPFIGPYLLFENTMSVTKFNAMVSGLF 637
            GVWRIKALE+SGGW+ERTTVEDMDIAVRAHL GWKF+FLNDV+  CE+PESYEAYRKQQHRWHSGPMQLFRLC   IIKSKI  WKK N             PFYSFTLFC+ILP+TMF+PEAELP WV+CY+P  MS LNILPAPKSFPFI PYLLFENTMSVTKFNAM+SGLF
Sbjct:  401 GVWRIKALEDSGGWMERTTVEDMDIAVRAHLKGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCFVDIIKSKIGFWKKFNLIFLFFLLRKLILPFYSFTLFCVILPMTMFVPEAELPAWVVCYIPATMSILNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLF 575          
BLAST of CF503928 vs. ExPASy Swiss-Prot
Match: CSLC1_ORYSJ (Probable xyloglucan glycosyltransferase 1 OS=Oryza sativa subsp. japonica GN=CSLC1 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 3.555e-79
Identity = 136/175 (77.71%), Postives = 148/175 (84.57%), Query Frame = 2
Query:  113 GVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIIKSKIPTWKKGNXXXXXXXXXXXXXPFYSFTLFCIILPLTMFIPEAELPVWVICYVPVFMSFLNILPAPKSFPFIGPYLLFENTMSVTKFNAMVSGLF 637
            GVWRIKALE+SGGW+ERTTVEDMDIAVRAHL GWKF+++NDV+  CE+PESYEAYRKQQHRWHSGPMQLFRLC   IIKSKI  WKK N             PFYSFTLFCIILP+TMF+PEAELP WV+CY+P  MS LNILPAPKSFPFI PYLLFENTMSVTKFNAM+SGLF
Sbjct:  404 GVWRIKALEDSGGWMERTTVEDMDIAVRAHLKGWKFLYINDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCFVDIIKSKIGVWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLF 578          
BLAST of CF503928 vs. ExPASy Swiss-Prot
Match: CSLC6_ARATH (Probable xyloglucan glycosyltransferase 6 OS=Arabidopsis thaliana GN=CSLC6 PE=1 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.546e-74
Identity = 130/175 (74.29%), Postives = 144/175 (82.29%), Query Frame = 2
Query:  113 GVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIIKSKIPTWKKGNXXXXXXXXXXXXXPFYSFTLFCIILPLTMFIPEAELPVWVICYVPVFMSFLNILPAPKSFPFIGPYLLFENTMSVTKFNAMVSGLF 637
            GVWRIKALE+ GGWLERTTVEDMDIAVRAHL GWKFI+LNDVK LCE+PESYEAY+KQQ+RWHSGPMQLFRLC   I++SK+   KK N             PFYSFTLFC+ILPLTMF PEA LP WV+CY+P  MS LNI+PAP+SFPFI PYLLFENTMSVTKF AM+SGLF
Sbjct:  392 GVWRIKALEDCGGWLERTTVEDMDIAVRAHLCGWKFIYLNDVKCLCELPESYEAYKKQQYRWHSGPMQLFRLCFFDILRSKVSAAKKANMIFLFFLLRKLILPFYSFTLFCVILPLTMFFPEANLPSWVVCYIPGIMSILNIIPAPRSFPFIVPYLLFENTMSVTKFGAMISGLF 566          
BLAST of CF503928 vs. ExPASy Swiss-Prot
Match: CSLA1_ORYSJ (Glucomannan 4-beta-mannosyltransferase 1 OS=Oryza sativa subsp. japonica GN=CSLA1 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.930e-45
Identity = 77/184 (41.85%), Postives = 114/184 (61.96%), Query Frame = 2
Query:   86 AFLVSTEQPGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIIKS-KIPTWKKGNXXXXXXXXXXXXXPFYSFTLFCIILPLTMFIPEAELPVWVICYVPVFMSFLNILPAPKSFPFIGPYLLFENTMSVTKFNAMVSGL 634
            AF       GVWR+ A+ E+GGW +RTTVEDMD+A+RA L GWKF++L DV+V  E+P +++A+R QQHRW  GP  LFR  L  I+++ K+  WKK +                +F  +C+I+P T+F+PE  +P W   Y+P  ++ LN +  P+SF  +  ++LFEN MS+ +  A + GL
Sbjct:  246 AFFGFNGTAGVWRVSAVNEAGGWKDRTTVEDMDLAIRASLKGWKFVYLGDVQVKSELPSTFKAFRFQQHRWSCGPANLFRKMLMEIVRNKKVTIWKKIHVIYNFFLIRKIIAHIVTFAFYCLIIPATIFVPEVRIPKWGCVYIPTIITLLNSVGTPRSFHLLFFWILFENVMSLHRTKATLIGL 429          

HSP 2 Score: 36.1946 bits (82), Expect = 2.930e-45
Identity = 15/32 (46.88%), Postives = 23/32 (71.88%), Query Frame = 3
Query:    3 ENLLTRLQNINLSFHFEVEQQVNRSISKLFWF 98
            E L+TR+Q ++L +HF VEQ+V+ S+   F F
Sbjct:  219 ECLMTRMQEMSLDYHFTVEQEVSSSVCAFFGF 250          
BLAST of CF503928 vs. ExPASy Swiss-Prot
Match: CSLA2_ARATH (Glucomannan 4-beta-mannosyltransferase 2 OS=Arabidopsis thaliana GN=CSLA2 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.138e-44
Identity = 76/185 (41.08%), Postives = 115/185 (62.16%), Query Frame = 2
Query:   86 AFLVSTEQPGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIIKS-KIPTWKKGNXXXXXXXXXXXXXPFYSFTLFCIILPLTMFIPEAELPVWVICYVPVFMSFLNILPAPKSFPFIGPYLLFENTMSVTKFNAMVSGLF 637
            AF       G+WRI A+ E+GGW +RTTVEDMD+AVRA L GWKF++L D++V  E+P ++ A+R QQHRW  GP  LFR  +  I+++ K+  WKK                + +F  +C++LPLT+ +PE ++P+W   Y+P  ++ LN +  P+S   +  ++LFEN MS+ +  A + GLF
Sbjct:  259 AFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQVKSELPSTFRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHWVTFCFYCVVLPLTILVPEVKVPIWGSVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATLIGLF 443          

HSP 2 Score: 35.039 bits (79), Expect = 4.138e-44
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 3
Query:    3 ENLLTRLQNINLSFHFEVEQQVNRSISKLFWF 98
            E LLTR+Q ++L +HF VEQ+V  S    F F
Sbjct:  232 ECLLTRMQEMSLDYHFTVEQEVGSSTHAFFGF 263          
BLAST of CF503928 vs. ExPASy Swiss-Prot
Match: CSLA4_ORYSJ (Probable mannan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLA4 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.346e-44
Identity = 70/175 (40.00%), Postives = 111/175 (63.43%), Query Frame = 2
Query:  113 GVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIIKSK-IPTWKKGNXXXXXXXXXXXXXPFYSFTLFCIILPLTMFIPEAELPVWVICYVPVFMSFLNILPAPKSFPFIGPYLLFENTMSVTKFNAMVSGL 634
            GVWR+ A+ E+GGW +RTTVEDMD+AVRA L GW+F+++ D++V  E+P +++AYR QQHRW  G   LFR     I K+K +  WKK +             P  +F  +C+++PL++ +PE  +PVW + Y+P  ++ +N +  P S   +  ++LFEN M++ +  A ++GL
Sbjct:  283 GVWRVSAINEAGGWKDRTTVEDMDLAVRASLKGWQFLYVGDIRVKSELPSTFKAYRHQQHRWTCGAANLFRKMATEIAKNKGVSVWKKLHLLYSFFFVRRVVAPILTFLFYCVVIPLSVMVPEVSIPVWGMVYIPTAITIMNAIRNPGSIHLMPFWILFENVMAMHRMRAALTGL 457          

HSP 2 Score: 33.113 bits (74), Expect = 6.346e-44
Identity = 13/30 (43.33%), Postives = 21/30 (70.00%), Query Frame = 3
Query:    9 LLTRLQNINLSFHFEVEQQVNRSISKLFWF 98
            L+TR+Q ++L +HF+VEQ+   S+   F F
Sbjct:  249 LMTRIQKMSLDYHFKVEQESGSSMHSFFGF 278          

HSP 3 Score: 25.0238 bits (53), Expect = 6.346e-44
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 1
Query:   85 SFFGFNGTA--WRL 120
            SFFGFNGTA  WR+
Sbjct:  274 SFFGFNGTAGVWRV 287          
BLAST of CF503928 vs. ExPASy Swiss-Prot
Match: CSLAB_ORYSJ (Probable mannan synthase 11 OS=Oryza sativa subsp. japonica GN=CSLA11 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.395e-43
Identity = 71/175 (40.57%), Postives = 113/175 (64.57%), Query Frame = 2
Query:  113 GVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIIKS-KIPTWKKGNXXXXXXXXXXXXXPFYSFTLFCIILPLTMFIPEAELPVWVICYVPVFMSFLNILPAPKSFPFIGPYLLFENTMSVTKFNAMVSGL 634
            GVWRI A++++GGW +RTTVEDMD+AVRA L GWKF+++ DVKV  E+P +++AYR QQHRW  GP  LF+  +  I+++ K+  W K +                +F  +C ++P+++++PE E+P+W + YVP  ++    +  P SF  +  ++LFEN MS+ +  A V+G+
Sbjct:  289 GVWRIAAIDDAGGWKDRTTVEDMDLAVRATLQGWKFVYVGDVKVKSELPSTFKAYRFQQHRWSCGPANLFKKMMVEILENKKVSFWNKIHLWYDFFFVGKIAAHTVTFIYYCFVIPVSVWLPEIEIPLWGVVYVPTVITLCKAVGTPSSFHLVILWVLFENVMSLHRIKAAVTGI 463          

HSP 2 Score: 33.113 bits (74), Expect = 1.395e-43
Identity = 14/32 (43.75%), Postives = 20/32 (62.50%), Query Frame = 3
Query:    3 ENLLTRLQNINLSFHFEVEQQVNRSISKLFWF 98
            E LLTR Q ++L +HF+ EQ+   S+   F F
Sbjct:  253 ECLLTRFQEMSLDYHFKYEQEAGSSVYSFFGF 284          

HSP 3 Score: 25.409 bits (54), Expect = 1.395e-43
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 1
Query:   85 SFFGFNGTA--WRL 120
            SFFGFNGTA  WR+
Sbjct:  280 SFFGFNGTAGVWRI 293          
BLAST of CF503928 vs. ExPASy Swiss-Prot
Match: CSLAE_ARATH (Probable mannan synthase 14 OS=Arabidopsis thaliana GN=CSLA14 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.994e-43
Identity = 78/175 (44.57%), Postives = 109/175 (62.29%), Query Frame = 2
Query:  113 GVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIIKSK-IPTWKKGNXXXXXXXXXXXXXPFYSFTLFCIILPLTMFIPEAELPVWVICYVPVFMSFLNILPAPKSFPFIGPYLLFENTMSVTKFNAMVSGL 634
            GVWRIKAL E+ GW +RT VEDMD+AVRA+L G KF++++DVKV  E+P S++AYR QQHRW  GP  LF+     IIK++ +  WKK                 ++F  +C+ILP T+  PE E+P W   Y+P  ++ LN +  PKSF  I  ++LFEN M++ +    + GL
Sbjct:  266 GVWRIKALNEAEGWKDRTIVEDMDLAVRAYLRGSKFVYVDDVKVKNELPSSFQAYRFQQHRWSCGPANLFKKIAMEIIKNQNVSLWKKVYLIYNFFFLRKIVVHIFTFVFYCVILPATVIFPEIEVPKWTTIYIPATITILNAIATPKSFYLILYWILFENVMAMHRSIGTLIGL 440          

HSP 2 Score: 31.187 bits (69), Expect = 3.994e-43
Identity = 14/32 (43.75%), Postives = 21/32 (65.62%), Query Frame = 3
Query:    3 ENLLTRLQNINLSFHFEVEQQVNRSISKLFWF 98
            E  +TR+Q ++L++HF VEQ+   SI   F F
Sbjct:  230 ECCMTRIQEMSLNYHFAVEQKSGSSILGFFGF 261          

HSP 3 Score: 25.7942 bits (55), Expect = 3.994e-43
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1
Query:   82 LSFFGFNGTA--WRLE 123
            L FFGFNGTA  WR++
Sbjct:  256 LGFFGFNGTAGVWRIK 271          
BLAST of CF503928 vs. ExPASy Swiss-Prot
Match: CSLA9_ORYSJ (Probable mannan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLA9 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.328e-42
Identity = 77/184 (41.85%), Postives = 108/184 (58.70%), Query Frame = 2
Query:   86 AFLVSTEQPGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAI-IKSKIPTWKKGNXXXXXXXXXXXXXPFYSFTLFCIILPLTMFIPEAELPVWVICYVPVFMSFLNILPAPKSFPFIGPYLLFENTMSVTKFNAMVSGL 634
            AF       GVWRI A+ E+GGW +RTTVEDMD+AVRA L GWKF++L D+ V  E+P +++A+R QQHRW  GP  LFR  L  I    K+  WKK                  +F  +C+++P T+ IPE E+P W   Y+P  ++ LN +  P+S   +  ++LFEN MS+ +  A + GL
Sbjct:  254 AFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYLGDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVRKIIGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPRSLHLLIFWVLFENVMSLHRTKATLIGL 437          

HSP 2 Score: 35.039 bits (79), Expect = 6.328e-42
Identity = 15/32 (46.88%), Postives = 22/32 (68.75%), Query Frame = 3
Query:    3 ENLLTRLQNINLSFHFEVEQQVNRSISKLFWF 98
            E L+TR+Q ++L +HF+VEQ+V  S    F F
Sbjct:  227 ECLMTRMQEMSLDYHFKVEQEVGSSTHAFFGF 258          
BLAST of CF503928 vs. ExPASy Swiss-Prot
Match: CSLA2_ORYSJ (Probable mannan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLA2 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 1.073e-41
Identity = 74/184 (40.22%), Postives = 112/184 (60.87%), Query Frame = 2
Query:   86 AFLVSTEQPGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIIKSK-IPTWKKGNXXXXXXXXXXXXXPFYSFTLFCIILPLTMFIPEAELPVWVICYVPVFMSFLNILPAPKSFPFIGPYLLFENTMSVTKFNAMVSGL 634
            AF       GVWR+ A+ +SGGW +RTTVEDMD+AVRA L GW+F+++ D++V  E+P +++AYR QQHRW  G   LFR     II +K +  WKK +             P  +F  +CI++PL+  +PE  +PVW + Y+P  ++ +N +  P S   +  ++LFEN M++ +  A +SGL
Sbjct:  305 AFFGFNGTAGVWRVSAINQSGGWKDRTTVEDMDLAVRASLKGWEFLYVGDIRVKSELPSTFQAYRHQQHRWTCGAANLFRKMAWEIITNKEVSMWKKYHLLYSFFFVRRAIAPILTFLFYCIVIPLSAMVPEVTIPVWGLVYIPTAITIMNAIRNPGSVHLMPFWILFENVMAMHRMRAALSGL 488          

HSP 2 Score: 30.4166 bits (67), Expect = 1.073e-41
Identity = 12/30 (40.00%), Postives = 20/30 (66.67%), Query Frame = 3
Query:    9 LLTRLQNINLSFHFEVEQQVNRSISKLFWF 98
            L+TR+Q ++L +HF+VEQ+    +   F F
Sbjct:  280 LMTRIQKMSLDYHFKVEQESGSFMHAFFGF 309          
The following BLAST results are available for this feature:
BLAST of CF503928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CSLC7_ORYSJ1.596e-7978.29Probable xyloglucan glycosyltransferase 7 OS=Oryza... [more]
CSLC1_ORYSJ3.555e-7977.71Probable xyloglucan glycosyltransferase 1 OS=Oryza... [more]
CSLC6_ARATH1.546e-7474.29Probable xyloglucan glycosyltransferase 6 OS=Arabi... [more]
CSLA1_ORYSJ2.930e-4541.85Glucomannan 4-beta-mannosyltransferase 1 OS=Oryza ... [more]
CSLA2_ARATH4.138e-4441.08Glucomannan 4-beta-mannosyltransferase 2 OS=Arabid... [more]
CSLA4_ORYSJ6.346e-4440.00Probable mannan synthase 4 OS=Oryza sativa subsp. ... [more]
CSLAB_ORYSJ1.395e-4340.57Probable mannan synthase 11 OS=Oryza sativa subsp.... [more]
CSLAE_ARATH3.994e-4344.57Probable mannan synthase 14 OS=Arabidopsis thalian... [more]
CSLA9_ORYSJ6.328e-4241.85Probable mannan synthase 9 OS=Oryza sativa subsp. ... [more]
CSLA2_ORYSJ1.073e-4140.22Probable mannan synthase 2 OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-416 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503928 ID=CF503928; Name=CF503928; organism=Citrus sinensis; type=EST; length=639bp
ATGAGAACTTGCTGACACGCCTCCAGAACATTAATTTGTCTTTTCATTTC
GAGGTGGAACAACAGGTTAACCGGAGTATTTCTAAGCTTTTTTGGTTTCA
ACGGAACAGCCTGGCGTCTGGAGAATTAAGGCCCTTGAAGAGTCTGGAGG
ATGGCTTGAAAGAACAACCGTAGAGGACATGGACATAGCTGTTCGTGCTC
ATCTCAATGGTTGGAAATTCATATTCCTTAATGATGTCAAGGTCCTTTGT
GAAGTTCCTGAGTCTTATGAAGCTTATAGAAAGCAGCAACATCGTTGGCA
TTCCGGCCCTATGCAACTTTTCCGCTTGTGTCTTCCAGCAATCATAAAAT
CTAAGATACCGACGTGGAAGAAAGGAAACTTAATACTGCTCTTCTTTCTA
TTGAGGAAACTTATACTTCCTTTCTATTCCTTCACATTGTTCTGCATAAT
TCTTCCTCTAACCATGTTCATACCCGAGGCAGAGCTTCCTGTGTGGGTCA
TTTGTTACGTTCCCGTTTTCATGTCATTCCTCAATATTCTTCCTGCCCCA
AAGTCCTTTCCTTTCATTGGGCCTTACCTCTTATTCGAGAACACTATGTC
AGTGACCAAATTCAATGCAATGGTATCTGGACTATTCCA
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