CF503928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503928 vs. ExPASy Swiss-Prot
Match: CSLA5_ORYSJ (Probable mannan synthase 5 OS=Oryza sativa subsp. japonica GN=CSLA5 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.693e-36 Identity = 70/184 (38.04%), Postives = 110/184 (59.78%), Query Frame = 2 Query: 86 AFLVSTEQPGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFR-LCLPAIIKSKIPTWKKGNXXXXXXXXXXXXXPFYSFTLFCIILPLTMFIPEAELPVWVICYVPVFMSFLNILPAPKSFPFIGPYLLFENTMSVTKFNAMVSGL 634 AF GVWR +A+ ++GGW +RTTVEDMD+AVRA L GWKFI+L D++V E+P +Y+AY +QQ RW G LFR + ++ K+ + KK P +F L+ +I+P+++ IPE LP+W + Y+P + + + P++ + ++LFE+ MS+ + A V+GL Sbjct: 296 AFFSFNGTAGVWRTEAINDAGGWKDRTTVEDMDLAVRATLKGWKFIYLGDLRVKSELPSTYKAYCRQQFRWSCGGANLFRKMIWDVLVAKKVSSLKKIYILYSFFLVRRVVAPAVAFILYNVIIPVSVMIPELFLPIWGVAYIPTALLIVTAIRNPENLHTVPLWILFESVMSMHRLRAAVAGL 479 HSP 2 Score: 28.1054 bits (61), Expect = 2.693e-36 Identity = 12/31 (38.71%), Postives = 18/31 (58.06%), Query Frame = 3 Query: 6 NLLTRLQNINLSFHFEVEQQVNRSISKLFWF 98 +LLTR+Q L +HF+ EQ+ + F F Sbjct: 270 SLLTRIQKTFLDYHFKAEQEAGSATFAFFSF 300
BLAST of CF503928 vs. ExPASy Swiss-Prot
Match: CSLA7_ORYSJ (Probable mannan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLA7 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.507e-36 Identity = 70/184 (38.04%), Postives = 108/184 (58.70%), Query Frame = 2 Query: 86 AFLVSTEQPGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFR-LCLPAIIKSKIPTWKKGNXXXXXXXXXXXXXPFYSFTLFCIILPLTMFIPEAELPVWVICYVPVFMSFLNILPAPKSFPFIGPYLLFENTMSVTKFNAMVSGL 634 AF GVWR A+ E+GGW +RTTVEDMD+AVRA LNGWKFI++ D++V E+P +Y AY +QQ RW G LFR + + ++ I KK P + L+ II+PL++ IPE +P+W + Y+P+ + + + P++ + ++LFE+ M+V + A ++GL Sbjct: 311 AFFSFNGTAGVWRTTAINEAGGWKDRTTVEDMDLAVRASLNGWKFIYVGDIRVKSELPSTYGAYCRQQFRWACGGANLFRKIAMDVLVAKDISLLKKFYMLYSFFLVRRVVAPMVACVLYNIIVPLSVMIPELFIPIWGVAYIPMALLIITTIRNPRNLHIMPFWILFESVMTVLRMRAALTGL 494 HSP 2 Score: 28.4906 bits (62), Expect = 3.507e-36 Identity = 12/31 (38.71%), Postives = 19/31 (61.29%), Query Frame = 3 Query: 6 NLLTRLQNINLSFHFEVEQQVNRSISKLFWF 98 +LLTR+Q + +HF+VEQ+ + F F Sbjct: 285 SLLTRVQKMFFDYHFKVEQEAGSATFAFFSF 315 The following BLAST results are available for this feature:
BLAST of CF503928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF503928 ID=CF503928; Name=CF503928; organism=Citrus sinensis; type=EST; length=639bpback to top |