CF503932

Overview
NameCF503932
Unique NameCF503932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length210
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503932 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.342e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = -3
Query:   65 FFVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM 202
            F VGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM
Sbjct:  323 FLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM 368          
BLAST of CF503932 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.342e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = -3
Query:   65 FFVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM 202
            F VGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM
Sbjct:  321 FLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM 366          
BLAST of CF503932 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.342e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = -3
Query:   65 FFVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM 202
            F VGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM
Sbjct:  321 FLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM 366          
BLAST of CF503932 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 3.342e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = -3
Query:   65 FFVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM 202
            F VGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM
Sbjct:  322 FLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM 367          
BLAST of CF503932 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 9.723e-19
Identity = 47/56 (83.93%), Postives = 48/56 (85.71%), Query Frame = -3
Query:   47 FFVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM----ALLLSP 202
            F VGAGIKPTSIVSYNHLGNNDGMNLSAPQ FRSKEISKSNVVDDM    A+L  P
Sbjct:  321 FLVGAGIKPTSIVSYNHLGNNDGMNLSAPQAFRSKEISKSNVVDDMVSSNAILYEP 376          
BLAST of CF503932 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.335e-17
Identity = 43/55 (78.18%), Postives = 43/55 (78.18%), Query Frame = -3
Query:   38 FFVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMALLLSPTYG 202
            F VGAGIKP SI SYNHLGNNDG NLSAPQ FRSKEISKSNVVDDM       YG
Sbjct:  322 FLVGAGIKPVSIASYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYG 376          
BLAST of CF503932 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 2.027e-16
Identity = 42/55 (76.36%), Postives = 43/55 (78.18%), Query Frame = -3
Query:   38 FFVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMALLLSPTYG 202
            F V AG+KP SIVSYNHLGNNDG NLSAPQ FRSKEISKSNVVDDM       YG
Sbjct:  315 FLVSAGLKPVSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVQSNPILYG 369          
BLAST of CF503932 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.027e-16
Identity = 42/55 (76.36%), Postives = 43/55 (78.18%), Query Frame = -3
Query:   38 FFVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMALLLSPTYG 202
            F V AG+KP SIVSYNHLGNNDG NLSAPQ FRSKEISKSNVVDDM       YG
Sbjct:  315 FLVSAGLKPVSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVQSNPILYG 369          
BLAST of CF503932 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.704e-16
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = -3
Query:   65 FFVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM 202
            + V AGIKP SIVSYNHLGNNDG NLSAPQ FRSKEI+KSNVVDDM
Sbjct:  321 YLVSAGIKPVSIVSYNHLGNNDGKNLSAPQQFRSKEITKSNVVDDM 366          
BLAST of CF503932 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.898e-14
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = -3
Query:   65 FFVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM 202
            F +G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE+SKSNVVDDM
Sbjct:  318 FLIGSGLKTMSIVSYNHLGNNDGENLSAPLQFRSKEVSKSNVVDDM 363          
The following BLAST results are available for this feature:
BLAST of CF503932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_MESCR3.342e-1997.83Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_CITPA3.342e-1997.83Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_BRANA3.342e-1997.83Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO1_ARATH3.342e-1997.83Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]
INO1_MAIZE9.723e-1983.93Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_DROME5.335e-1778.18Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1B_XENLA2.027e-1676.36Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1A_XENLA2.027e-1676.36Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1_DICDI7.704e-1684.78Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1_MACFA1.898e-1478.26Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-420 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503932 ID=CF503932; Name=CF503932; organism=Citrus sinensis; type=EST; length=210bp
GTGAACACCCCGACCACGTTGTGGTCATCAAGTATGTGCCATATGTTGGC
GATAGCAAGAGAGCCATGTCATCAACAACATTACTTTTGGAAATCTCCTT
GGAGCGGAAGGTTTGAGGAGCTGAAAGATTCATTCCATCATTGTTTCCCA
AGTGGTTGTAGCTAACAATTGATGTTGGCTTGATTCCTGCCCCAACAAAA
AAAAAAAAAA
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