CF503937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19_HUMAN (40S ribosomal protein S19 OS=Homo sapiens GN=RPS19 PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 3.546e-29 Identity = 58/100 (58.00%), Postives = 75/100 (75.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TVKDV+ EFV+A +A LK+SGK+++P W D VK A+ KELAPYD +W+Y RAAS AR +YLR G GVGS +IYGG +RNG P HF + S ++AR +L Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVL 104
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19_BOVIN (40S ribosomal protein S19 OS=Bos taurus GN=RPS19 PE=2 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 3.546e-29 Identity = 58/100 (58.00%), Postives = 75/100 (75.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TVKDV+ EFV+A +A LK+SGK+++P W D VK A+ KELAPYD +W+Y RAAS AR +YLR G GVGS +IYGG +RNG P HF + S ++AR +L Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVL 104
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19B_SCHPO (40S ribosomal protein S19-B OS=Schizosaccharomyces pombe GN=rps19b PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 4.632e-29 Identity = 58/100 (58.00%), Postives = 72/100 (72.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 +VKDV +F+ AY+A LKRSGKM P W DIVKT KELAPYDPDWYYVRAA++AR IYLR+ +GVG ++YGGS G RP H SG++ R ++ Sbjct: 5 SVKDVDAQQFINAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVV 104
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19_PIG (40S ribosomal protein S19 (Fragment) OS=Sus scrofa GN=RPS19 PE=2 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 6.049e-29 Identity = 58/100 (58.00%), Postives = 74/100 (74.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TVKDV+ EFV+A +A LK+SGK+++P W D VK A KELAPYD +W+Y RAAS AR +YLR G GVGS +IYGG +RNG P HF + S ++AR +L Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVL 104
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19A_SCHPO (40S ribosomal protein S19-A OS=Schizosaccharomyces pombe GN=rps19a PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 7.901e-29 Identity = 58/100 (58.00%), Postives = 72/100 (72.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 +VKDV +F+ AY+A LKRSGKM P W DIVKT KELAPYDPDWYYVRAA++AR IYLR+ +GVG ++YGGS G RP H SG++ R ++ Sbjct: 5 SVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVV 104
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19_MYXGL (40S ribosomal protein S19 OS=Myxine glutinosa GN=rps19 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.348e-28 Identity = 55/100 (55.00%), Postives = 75/100 (75.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TVKDV+ EFVKA +A K+SGK++ P W D VK + KELAP+D DWYY+R AS+AR +Y+R G+GVG+ +IYGG +RNG+RP H+ + S +AR +L Sbjct: 5 TVKDVNQQEFVKALAAFFKKSGKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHLYMRGGVGVGAMTKIYGGRQRNGTRPSHYSRGSRNVARKVL 104
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19A_DROME (40S ribosomal protein S19a OS=Drosophila melanogaster GN=RpS19a PE=2 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 5.121e-28 Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TVKD+ H KA + LK++GK+++P DIVKTA+FKELAPYDPDW+YVR AS+ R +Y R GVGS +IYGG KRNG P HFC+++ AR L Sbjct: 5 TVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKAL 104
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19_ICTPU (40S ribosomal protein S19 OS=Ictalurus punctatus GN=rps19 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.688e-28 Identity = 58/100 (58.00%), Postives = 74/100 (74.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TVKDV+ EFV+A +A LK+SGK+++P W DIVK A+ KELAP D +W+Y+RAAS R +YLR G+GVGS +IYGG KRNG P HF S +AR +L Sbjct: 7 TVKDVNQQEFVRALAAFLKKSGKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHLYLRGGVGVGSMIKIYGGRKRNGVCPSHFSVGSKNVARKVL 106
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19_DICDI (40S ribosomal protein S19 OS=Dictyostelium discoideum GN=rps19 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.542e-27 Identity = 51/103 (49.51%), Postives = 75/103 (72.82%), Query Frame = 1 Query: 85 TARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TA T+KDV P EF+ Y+ LK++G++++P W DI KTA ++EL P +PDW Y R A++ARK+Y+R G GV ++RR++GG++RNG RP HF +G R+ L Sbjct: 4 TAVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLARKVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCL 106
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19S_ASCSU (40S ribosomal protein S19S OS=Ascaris suum GN=RPS19S PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.542e-27 Identity = 54/105 (51.43%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 79 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 M +VKDV HE V+ + LK+SGK+++P W+D+VK KELAP D DWYYVR AS+AR++Y+R GVG+ RR+YGG+KR G P HF ++SG++ R L Sbjct: 1 MVKQPSVKDVDQHEIVRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGGNKRRGVTPNHFARASGSVIRKAL 105 The following BLAST results are available for this feature:
BLAST of CF503937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503937 ID=CF503937; Name=CF503937; organism=Citrus sinensis; type=EST; length=394bpback to top |