CF503937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19E_ARCFU (30S ribosomal protein S19e OS=Archaeoglobus fulgidus GN=rps19e PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.232e-15 Identity = 44/101 (43.56%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPP-WTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TV DV +K + LK M PP W VKT KE +P DW+Y+R AS+ R++Y+ +G+ R YGG KR GS+PP F K SGAI R+ L Sbjct: 3 TVYDVPADLLIKRVAERLK---DMVAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNAL 100
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19E_METJA (30S ribosomal protein S19e OS=Methanocaldococcus jannaschii GN=rps19e PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.108e-14 Identity = 41/100 (41.00%), Postives = 53/100 (53.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TV DV + ++ + LK + +P W D VKT +E P DW+Y+R AS+ RKIY+ +GV R YGG K G P HF K SG I R L Sbjct: 3 TVYDVPADKLIQKTAEKLKEMN-IGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKIYIYGPVGVSRLRTAYGGRKNRGHEPEHFYKGSGNIIRKAL 101
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19E_AERPE (30S ribosomal protein S19e OS=Aeropyrum pernix GN=rps19e PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.179e-14 Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 1 Query: 172 PPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLR-QGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 P W KT KE P D DW+YVRAAS+ RK+Y + +G+ +FR IYGG + GS P HF K+ G++ R IL Sbjct: 30 PAWAYFAKTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKIL 104
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19E_PYRHO (30S ribosomal protein S19e OS=Pyrococcus horikoshii GN=rps19e PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.728e-13 Identity = 37/100 (37.00%), Postives = 52/100 (52.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TV DV V+ + LK +++ P W VKT + KE P DW+Y R AS+ R++Y+ +G+ R YGG K G P F K+ G+I R L Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKAL 102
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19E_THEVO (30S ribosomal protein S19e OS=Thermoplasma volcanium GN=rps19e PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.145e-12 Identity = 38/99 (38.38%), Postives = 48/99 (48.48%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHI 390 +VK V + S LK K++ P W VKT KE P DW YVRAASM RK+Y+ LG+ YGG GS+ H S +I R + Sbjct: 3 SVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSITRFL 101
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19E_THEAC (30S ribosomal protein S19e OS=Thermoplasma acidophilum GN=rps19e PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.553e-11 Identity = 36/99 (36.36%), Postives = 52/99 (52.53%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHI 390 +VK V + S LK K+ P W+ VKT +E +P + DW YVRAA+M RK+Y+ LG+ YGG GS+ H + S +I R++ Sbjct: 3 SVKYVPSDLLINYVSEKLKSEKKIAEPDWSKYVKTGISREKSPVNRDWIYVRAAAMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAAQGSRSIIRYL 101 The following BLAST results are available for this feature:
BLAST of CF503937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF503937 ID=CF503937; Name=CF503937; organism=Citrus sinensis; type=EST; length=394bpback to top |