CF504033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 6.007e-61 Identity = 109/189 (57.67%), Postives = 147/189 (77.78%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE +D+ +D++R+L DNC GLQGF VF++ DYGKKSKL F+VYP+P +++SVVEPYNSVL+TH+ LEH+D + ++DNEAIYDIC+++L+I +P TNLNRL++QV+SS+TASLRFDG+LNVD+ EFQTNLVP+PRIHF L++ AP++S +KA HE SVAE+T S FEP + Sbjct: 111 KEQIDVVMDKVRRLVDNCNGLQGFFVFHSFGGGTGSGFGALILERLSTDYGKKSKLEFSVYPAPTLASSVVEPYNSVLTTHTTLEHSDCSFMVDNEAIYDICKKNLNIAQPGLTNLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPFPRIHFPLATLAPIVSVDKAGHESNSVAEMTYSCFEPGN 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA6_NAEGR (Tubulin alpha-6 chain OS=Naegleria gruberi GN=TUBA6 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 7.846e-61 Identity = 109/190 (57.37%), Postives = 148/190 (77.89%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 K+++D+ +DR+RK+ADNCT LQGF +F++V V++ KK KL +TVYPSPQ++TSVVEPYNSVLSTHSLLEH D++V+LDN+AIYDIC++ L IER Y NLN ++SQ +S++T SLRF G+LNVD+ E+QTNLVPYPRIHFMLSS AP+IS ++ ++ + +VAE+T+S FE +M Sbjct: 110 KDMLDVTVDRLRKIADNCTSLQGFQIFHSVGGGTGSGFASLLVERLSVEFPKKCKLSYTVYPSPQLATSVVEPYNSVLSTHSLLEHNDISVVLDNQAIYDICKQRLKIERANYRNLNHVISQTVSAITCSLRFSGSLNVDMNEYQTNLVPYPRIHFMLSSLAPMISRQENYYHENNVAELTSSVFEADNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA2_EMENI (Tubulin alpha-2 chain OS=Emericella nidulans GN=tubB PE=3 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 7.846e-61 Identity = 110/189 (58.20%), Postives = 146/189 (77.25%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE+VD +DR+R+L+DNC+ LQGFLVF++ +YGKKSKL F VYPSP+VST+VVEPYN+VLSTHS +E++D L+DNEA+YDICRR+LDI RP++ +LNRL++QV+SS+T+SLRFDGALNVD+ EFQTNLVP+PRIH+ L SYAPVIS+ ++ HE V ++T EP++ Sbjct: 114 KELVDTVVDRVRRLSDNCSSLQGFLVFHSFGGGTGSGFGALLLERLSTEYGKKSKLEFAVYPSPRVSTAVVEPYNAVLSTHSTIENSDCTFLVDNEAVYDICRRNLDIPRPSFEHLNRLIAQVVSSITSSLRFDGALNVDLNEFQTNLVPFPRIHYPLISYAPVISSNRSSHESFKVQDLTLQCAEPNN 302
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA_GLOLA (Tubulin alpha chain OS=Glomerella lagenarium GN=TUB1 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.283e-60 Identity = 113/189 (59.79%), Postives = 145/189 (76.72%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE+VD +DRIR++ADNC LQGFL+F++ +YGKKSKL F VYP+P+VST+VVEPYN+VLSTHS +E++D L+DNEA+YDICRR+LDI RP+Y +LNRL++QV+SS+T+SLRFDGALNVD+ EFQTNLVPYPRIH+ L SYAPVIS K+ HE V ++T FEP++ Sbjct: 113 KEMVDNVIDRIRRVADNCHSLQGFLIFHSFGGGTGSGFGALLLERLSTEYGKKSKLEFAVYPAPRVSTAVVEPYNAVLSTHSTIENSDCTFLVDNEAVYDICRRNLDIPRPSYDHLNRLIAQVVSSITSSLRFDGALNVDLNEFQTNLVPYPRIHYPLISYAPVISGFKSAHESFKV-QLTFQCFEPNN 300
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA_AJECA (Tubulin alpha chain (Fragment) OS=Ajellomyces capsulata GN=TUB1 PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 2.981e-60 Identity = 115/190 (60.53%), Postives = 145/190 (76.32%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA-SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE++D CLD++R++ADNC+GLQGFLVF++ VDYGKK+KL F VYP+PQ +TSVVEPYNS+L+TH+ LEH+DV ++DNEAIYDICRR+L IERP+Y N NRL++Q S +TA L FD ALNVD+ EFQTNLVPYPRIHF L+SY+PV+SA KA HE SV E+T FEP++ Sbjct: 112 KEMIDQCLDKVRRVADNCSGLQGFLVFHSFGGGQGSGFGALLMERLSVDYGKKTKLEFCVYPAPQNATSVVEPYNSILTTHTTLEHSDVQFMVDNEAIYDICRRNLGIERPSYENSNRLMAQGQSPITAIMLLFDCALNVDLNEFQTNLVPYPRIHFPLASYSPVVSAGKASHESNSVMEVTIVCFEPNN 301
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA_ENCHE (Tubulin alpha chain (Fragment) OS=Encephalitozoon hellem GN=TUB1 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 3.894e-60 Identity = 107/189 (56.61%), Postives = 152/189 (80.42%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KEI++ +++IR++ADNC GLQGFL++++ ++GKKSKL F+VYP+P+++T+VVEPYNS+L+TH+ L+++D + L+DNEAIYD+CR +L I+RP YT++NR+++QV+SS+TASLRF G+LNVD+TEFQTNLVPYPRIHF L +Y+P++S EKA HE+LSV EITN+ FEP S Sbjct: 87 KEIIEPVMEQIRRMADNCDGLQGFLIYHSFGGGTGSGFASLMMDRLAAEFGKKSKLEFSVYPAPKIATAVVEPYNSILTTHTTLDYSDCSFLVDNEAIYDMCR-NLGIQRPYYTDINRIIAQVVSSITASLRFPGSLNVDLTEFQTNLVPYPRIHFPLVAYSPMLSKEKAAHEKLSVQEITNACFEPQS 274
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBAL3_HUMAN (Tubulin alpha chain-like 3 OS=Homo sapiens GN=TUBAL3 PE=1 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 1.933e-59 Identity = 105/188 (55.85%), Postives = 144/188 (76.60%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 E++DL L+R RKLA+ C GLQGFL+F + +Y +K+KL F+VYP+P++ST+VVEPYNSVL+THS EHTD ++DNEA+YDIC R L +E P++ ++NRLV QV+SS+TASLRF+G LNVD+ EFQTNLVPYPRIHF ++++AP++SA+KA+HEQ SV++IT + FE S+ Sbjct: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYPAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITTACFESSN 307
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 1.933e-59 Identity = 107/186 (57.53%), Postives = 145/186 (77.96%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFE 560 KE++D +D++R+LADNC+G QG VF++ DYGKK+KL F VYP+PQ+S+SVVEPYNS+L+TH+ LEH+D + ++DNEAIYDIC+++L + +P +TNLNRL++QV+SS+TASLRFDG+LNVD+ EFQTNLVP+PRIHF L+SYAP++SA + HEQ SV E+T S FE Sbjct: 110 KELIDPVMDKLRRLADNCSGRQGLFVFHSFGGGTGSGFGALLLERLSTDYGKKAKLEFCVYPAPQLSSSVVEPYNSLLTTHTTLEHSDCSFMVDNEAIYDICKKNLGVAQPGFTNLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPFPRIHFPLASYAPLLSAPRRQHEQNSVEEMTFSCFE 295
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA_ENCCU (Tubulin alpha chain OS=Encephalitozoon cuniculi GN=TUB1 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 3.296e-59 Identity = 105/189 (55.56%), Postives = 152/189 (80.42%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KEI++ +++IR++AD+C GLQGFL++++ ++GKKSKL F+VYP+P+++T+VVEPYNS+L+TH+ L+++D + L+DNEAIYD+CR +L I+RP YT++NR+++QV+SS+TASLRF G+LNVD+TEFQTNLVPYPRIHF L +Y+P++S EKA HE+LSV EITN+ FEP + Sbjct: 109 KEIIEPAMEQIRRMADSCDGLQGFLIYHSFGGGTGSGFASLMMDRLAAEFGKKSKLEFSVYPAPKIATAVVEPYNSILTTHTTLDYSDCSFLVDNEAIYDMCR-NLGIQRPYYTDINRVIAQVVSSITASLRFPGSLNVDLTEFQTNLVPYPRIHFPLVAYSPMLSKEKAAHEKLSVQEITNACFEPQN 296
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBAL3_MOUSE (Tubulin alpha chain-like 3 OS=Mus musculus GN=Tubal3 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 7.344e-59 Identity = 106/188 (56.38%), Postives = 147/188 (78.19%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 E+++L L+RIRKLA+ C+GLQGFL++ + V+Y KK KL F+VYPSP++ST+VVEPYN++L+THS +E++D A ++DNEA+YDIC+ L I RP+Y ++NRL++QV SS+TASLRF+G LNVD+ EFQTNLVPYPRIHF +++ AP+ISAEKA+ EQLSV+++T S FE S+ Sbjct: 120 EVIELVLERIRKLAEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKIKLEFSVYPSPRISTAVVEPYNAILTTHSTIEYSDCAFMVDNEALYDICQHKLGIGRPSYASINRLIAQVSSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPITALAPIISAEKAYQEQLSVSDVTASCFEVSN 307 The following BLAST results are available for this feature:
BLAST of CF504033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504033 ID=CF504033; Name=CF504033; organism=Citrus sinensis; type=EST; length=574bpback to top |