CF504041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504041 vs. ExPASy Swiss-Prot
Match: RS11_MACFA (40S ribosomal protein S11 OS=Macaca fascicularis GN=RPS11 PE=2 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 1.438e-45 Identity = 87/144 (60.42%), Postives = 108/144 (75.00%), Query Frame = 3 Query: 57 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRLLSKTVRFNVLKVIPA 485 QTE+A+ KQP +F + R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CR LSKTVRFNVLKV A Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA 148
BLAST of CF504041 vs. ExPASy Swiss-Prot
Match: RS11_HUMAN (40S ribosomal protein S11 OS=Homo sapiens GN=RPS11 PE=1 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 1.438e-45 Identity = 87/144 (60.42%), Postives = 108/144 (75.00%), Query Frame = 3 Query: 57 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRLLSKTVRFNVLKVIPA 485 QTE+A+ KQP +F + R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CR LSKTVRFNVLKV A Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA 148
BLAST of CF504041 vs. ExPASy Swiss-Prot
Match: RS11_BOVIN (40S ribosomal protein S11 OS=Bos taurus GN=RPS11 PE=2 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 1.438e-45 Identity = 87/144 (60.42%), Postives = 108/144 (75.00%), Query Frame = 3 Query: 57 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRLLSKTVRFNVLKVIPA 485 QTE+A+ KQP +F + R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CR LSKTVRFNVLKV A Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA 148
BLAST of CF504041 vs. ExPASy Swiss-Prot
Match: RS11_DICDI (40S ribosomal protein S11 OS=Dictyostelium discoideum GN=rps11 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 4.184e-45 Identity = 89/139 (64.03%), Postives = 104/139 (74.82%), Query Frame = 3 Query: 57 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRLLSKTVRFNVLK 473 Q EKAF KQ F + R++K+IGLG++TP++AIEGTYIDKKCPFT VSIRG IL GT S KM RT++VRRNYLH++KKY R+EKRHSNIPAH+SP F VKEGD V IGQCR LSKTVRFNV+K Sbjct: 5 QAEKAFQKQQVSFKNRFQLKASKGKEGI--RYYKNIGLGYRTPKDAIEGTYIDKKCPFTSDVSIRGAILRGTVISTKMRRTLVVRRNYLHYIKKYNRFEKRHSNIPAHVSPAFNVKEGDSVTIGQCRPLSKTVRFNVIK 141
BLAST of CF504041 vs. ExPASy Swiss-Prot
Match: RS11_SCHPO (40S ribosomal protein S11 OS=Schizosaccharomyces pombe GN=rps11a PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 9.320e-45 Identity = 86/141 (60.99%), Postives = 104/141 (73.76%), Query Frame = 3 Query: 57 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRLLSKTVRFNVLKVI 479 Q+E+AF KQP +F ++ R++K +GLGFKTP EAI G Y+DKKCPF G VSIRGRIL GT S KM+RTII+RR YLHF+ KY RYEKRH N+ AH+SP FR+ EGD V +GQCR LSKTVRFNVL+V+ Sbjct: 8 QSERAFQKQPHIFQNAKKGAG--------RRWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRINEGDVVTVGQCRPLSKTVRFNVLRVV 140
BLAST of CF504041 vs. ExPASy Swiss-Prot
Match: RS11_YEAST (40S ribosomal protein S11 OS=Saccharomyces cerevisiae GN=RPS11A PE=1 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 6.041e-44 Identity = 85/143 (59.44%), Postives = 106/143 (74.13%), Query Frame = 3 Query: 57 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRLLSKTVRFNVLKVIPA 485 Q+E+AF KQP +F + R++K+ GLGFKTP+ AIEG+YIDKKCPFTG VSIRG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+ GD V +GQCR +SKTVRFNV+KV A Sbjct: 8 QSERAFQKQPHIFNNPKVKTSKRT-----KRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVTVGQCRPISKTVRFNVVKVSAA 145
BLAST of CF504041 vs. ExPASy Swiss-Prot
Match: RS11_DROPS (40S ribosomal protein S11 OS=Drosophila pseudoobscura pseudoobscura GN=RpS11 PE=3 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 1.819e-40 Identity = 86/144 (59.72%), Postives = 102/144 (70.83%), Query Frame = 3 Query: 48 MAEQTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRLLSKTVRFNVLKV 476 MA+Q E+AF KQ V L+ R ++ +GLGFKTPREAI+GTYIDKKCP+TG V IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V IG+CR LSKTVRFNVLKV Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGVTKKKIL--RRYRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILIGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142
BLAST of CF504041 vs. ExPASy Swiss-Prot
Match: RS11_DROYA (40S ribosomal protein S11 OS=Drosophila yakuba GN=RpS11 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.376e-40 Identity = 87/144 (60.42%), Postives = 102/144 (70.83%), Query Frame = 3 Query: 48 MAEQTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRLLSKTVRFNVLKV 476 MA+Q E+AF KQ V L+ R + +GLGFKTPREAI+GTYIDKKCP+TG V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V IG+CR LSKTVRFNVLKV Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGITKKKLL--RRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142
BLAST of CF504041 vs. ExPASy Swiss-Prot
Match: RS11_DROME (40S ribosomal protein S11 OS=Drosophila melanogaster GN=RpS11 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.376e-40 Identity = 87/144 (60.42%), Postives = 102/144 (70.83%), Query Frame = 3 Query: 48 MAEQTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRLLSKTVRFNVLKV 476 MA+Q E+AF KQ V L+ R + +GLGFKTPREAI+GTYIDKKCP+TG V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V IG+CR LSKTVRFNVLKV Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGITKKKLL--RRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142
BLAST of CF504041 vs. ExPASy Swiss-Prot
Match: RS11_ANOGA (40S ribosomal protein S11 OS=Anopheles gambiae GN=RpS11 PE=2 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 3.103e-40 Identity = 77/111 (69.37%), Postives = 91/111 (81.98%), Query Frame = 3 Query: 147 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRLLSKTVRFNVLKV 476 R SIGLGFKTP+EAI GTYIDKKCPFTG +SIRGRIL G KM+RTI++RR+YLHF++KY R+EKRH N+ H+SPCFR V+ GD V +G+CR LSKTVRFNVLKV Sbjct: 30 RMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISIRGRILTGVVRKMKMHRTIVIRRDYLHFIRKYDRFEKRHRNMSVHLSPCFRDVEAGDIVTVGECRPLSKTVRFNVLKV 140 The following BLAST results are available for this feature:
BLAST of CF504041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504041 ID=CF504041; Name=CF504041; organism=Citrus sinensis; type=EST; length=491bpback to top |