CF504043

Overview
NameCF504043
Unique NameCF504043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKM_ARATH (Calcium-dependent protein kinase 22 OS=Arabidopsis thaliana GN=CPK22 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 5.119e-26
Identity = 53/95 (55.79%), Postives = 70/95 (73.68%), Query Frame = 3
Query:  240 QLHDAILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            Q  + IL K  ED+K HY+ G ELG+G FG TYLC ENSTG  +ACKSIPKR L ++  K+ V+ E+++M ++SGQPNIVQ K +YED+  +HIV
Sbjct:   19 QKQETILGKPLEDIKKHYSFGDELGKGNFGTTYLCKENSTGKSYACKSIPKRTLSSEEEKEAVKTEIQIMDHVSGQPNIVQIKGSYEDNNSIHIV 113          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKN_ARATH (Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.647e-24
Identity = 50/92 (54.35%), Postives = 71/92 (77.17%), Query Frame = 3
Query:  249 DAILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            + IL K +ED++  Y+LGRELGRG  GITY+C E  TG  +ACKSI KRKL+++  ++DV+ E+++MQ+LSGQPN+V+ K +YED   VH+V
Sbjct:   55 ETILGKPFEDIRKFYSLGRELGRGGLGITYMCKEIGTGNIYACKSILKRKLISELGREDVKTEIQIMQHLSGQPNVVEIKGSYEDRHSVHLV 146          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPK4_SOLTU (Calcium-dependent protein kinase 4 OS=Solanum tuberosum GN=CPK4 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.792e-24
Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 3
Query:  291 YTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            YTLGR+LG+G+FG TYLCTENSTG E+ACKSI KRKL++    +DVRRE+++M +LSG  NIV  K AYED  +VHIV
Sbjct:   94 YTLGRKLGQGQFGTTYLCTENSTGAEYACKSISKRKLISKEDVEDVRREIQIMHHLSGHRNIVTIKGAYEDPLYVHIV 171          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKB_ORYSJ (Calcium-dependent protein kinase isoform 11 OS=Oryza sativa subsp. japonica GN=CPK11 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.394e-23
Identity = 49/90 (54.44%), Postives = 67/90 (74.44%), Query Frame = 3
Query:  255 ILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            +L +   D++ HY +GR+LG+G+FG TYLCTE +TG E+ACK+IPKRKL+     +DVRRE+++M +LSG  N+V  K  YED Q VHIV
Sbjct:   67 VLGRKTADLREHYIIGRKLGQGQFGTTYLCTEINTGCEYACKTIPKRKLITKEDVEDVRREIQIMHHLSGHKNVVAIKDVYEDGQAVHIV 156          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPK1_ARATH (Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.056e-23
Identity = 48/92 (52.17%), Postives = 69/92 (75.00%), Query Frame = 3
Query:  249 DAILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            +++L +  E+ K  Y+LGR+LG+G+FG T+LC E +TG EFACKSI KRKL+ D   +DVRRE+++M +L+G PN++  K AYED   VH+V
Sbjct:  136 ESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCVEKTTGKEFACKSIAKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLV 227          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPK5_SOLTU (Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.013e-22
Identity = 47/78 (60.26%), Postives = 63/78 (80.77%), Query Frame = 3
Query:  291 YTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            YTLGR+LG+G+FG TYLCTE S+G+++ACKSI KRKL++    +DVRRE+++M +L+G  NIV  K AYED  +VHIV
Sbjct:   72 YTLGRKLGQGQFGTTYLCTELSSGIDYACKSIAKRKLISKEDVEDVRREIQIMHHLAGHKNIVSIKGAYEDPLYVHIV 149          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPK2_ARATH (Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.013e-22
Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = 3
Query:  249 DAILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            +++L +  E+ K  Y+LGR+LG+G+FG T+LC E  TG E+ACKSI KRKL+ D   +DVRRE+++M +L+G PN++  K AYED   VH+V
Sbjct:  172 ESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLV 263          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKK_ARATH (Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.629e-22
Identity = 57/148 (38.51%), Postives = 86/148 (58.11%), Query Frame = 3
Query:   81 PPAKVKS*GPVSHPLCRWRPEMGCIFSKGQDSDHPAARQLHDKGQDGDYPAARQLHDAILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            PP K+ +  P   P+           +K   +  P  ++ H K       A  Q+ D++L +  E++K  Y++GR+LG+G+FG T+LC +  TG EFACK+I KRKL      +DVRRE+++M +LSG PN++Q   AYED   VH+V
Sbjct:   77 PPVKMANEEPPPKPITE---------NKEDPNSKPQKKEAHMKRMAS---AGLQI-DSVLGRKTENLKDIYSVGRKLGQGQFGTTFLCVDKKTGKEFACKTIAKRKLTTPEDVEDVRREIQIMHHLSGHPNVIQIVGAYEDAVAVHVV 211          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKT_ARATH (Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 3.434e-22
Identity = 50/90 (55.56%), Postives = 66/90 (73.33%), Query Frame = 3
Query:  255 ILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            IL +   D+   Y L +ELGRG+FGITY CT+ S G E+ACKSI KRKL+     +DVRREV ++Q+L+GQPNIV+F+ AYED   +H+V
Sbjct:   73 ILNRPMIDLSALYDLHKELGRGQFGITYKCTDKSNGREYACKSISKRKLIRRKDIEDVRREVMILQHLTGQPNIVEFRGAYEDKDNLHLV 162          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKP_ARATH (Calcium-dependent protein kinase 25 OS=Arabidopsis thaliana GN=CPK25 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.434e-22
Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 3
Query:  279 VKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            +K +Y LG +LG G+FG T++C E  TG E+ACKSIPKRKL N+   +DVRRE+E+M++L GQPN++  K AYED   VH+V
Sbjct:  128 LKEYYNLGSKLGHGQFGTTFVCVEKGTGEEYACKSIPKRKLENEEDVEDVRREIEIMKHLLGQPNVISIKGAYEDSVAVHMV 209          
The following BLAST results are available for this feature:
BLAST of CF504043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CDPKM_ARATH5.119e-2655.79Calcium-dependent protein kinase 22 OS=Arabidopsis... [more]
CDPKN_ARATH1.647e-2454.35Calcium-dependent protein kinase 23 OS=Arabidopsis... [more]
CDPK4_SOLTU4.792e-2465.38Calcium-dependent protein kinase 4 OS=Solanum tube... [more]
CDPKB_ORYSJ1.394e-2354.44Calcium-dependent protein kinase isoform 11 OS=Ory... [more]
CDPK1_ARATH4.056e-2352.17Calcium-dependent protein kinase 1 OS=Arabidopsis ... [more]
CDPK5_SOLTU2.013e-2260.26Calcium-dependent protein kinase 5 OS=Solanum tube... [more]
CDPK2_ARATH2.013e-2251.09Calcium-dependent protein kinase 2 OS=Arabidopsis ... [more]
CDPKK_ARATH2.629e-2238.51Calcium-dependent protein kinase 20 OS=Arabidopsis... [more]
CDPKT_ARATH3.434e-2255.56Calcium-dependent protein kinase 29 OS=Arabidopsis... [more]
CDPKP_ARATH3.434e-2256.10Calcium-dependent protein kinase 25 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-531 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504043 ID=CF504043; Name=CF504043; organism=Citrus sinensis; type=EST; length=524bp
ATTTTAAAGAATCAATTCAAAGGCAGGAACTGTGATGTGTAGTTGAATAC
ATCTGGGTCCTGCATATTCTTTGAAATTGCCCACCTGCAAAAGTCAAATC
CTGAGGTCCTGTCTCGCATCCTCTGTGCCGGTGGCGGCCAGAAATGGGTT
GCATTTTCAGCAAAGGCCAAGACTCAGACCACCCAGCAGCACGCCAACTC
CATGACAAAGGCCAAGATGGAGACTACCCAGCAGCACGCCAACTCCATGA
TGCAATTCTTTGTAAAGCTTATGAGGATGTTAAGTTACATTATACTCTTG
GTAGAGAATTGGGTAGGGGTGAATTTGGTATAACCTATCTTTGTACTGAG
AATTCAACCGGTTTGGAATTTGCTTGCAAGTCTATTCCTAAAAGAAAGCT
GGTAAATGATTATTATAAGGATGATGTAAGAAGAGAGGTTGAGGTAATGC
AATATTTGAGTGGGCAGCCCAACATAGTCCAATTCAAGGCTGCTTATGAG
GATGACCAATTTGTGCATATTGTT
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