CF504043

Overview
NameCF504043
Unique NameCF504043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPK1_ORYSJ (Calcium-dependent protein kinase isoform 1 OS=Oryza sativa subsp. japonica GN=SPK PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 2.461e-20
Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 3
Query:  276 DVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKL--VNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            +V+  YTLGRELG+G+FG TYLCTE STG ++ACK+I K  L  V+D   +DVRRE+++M +LSGQ NIV  K  YED+Q VHIV
Sbjct:   68 NVRELYTLGRELGQGQFGKTYLCTEISTGCQYACKTILKSNLRCVSDI--EDVRREIQIMHHLSGQKNIVTIKDTYEDEQAVHIV 150          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.198e-20
Identity = 51/96 (53.12%), Postives = 61/96 (63.54%), Query Frame = 3
Query:  237 RQLHDAILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            R L D I       +   Y LGRELGRGEFGITYLCT+  T    ACKSI KRKL      +DVRREV +M  L   PN+V+ KA+YED++ VH+V
Sbjct:   45 RVLKDVIPMSNQTQISDKYILGRELGRGEFGITYLCTDRETHEALACKSISKRKLRTAVDIEDVRREVAIMSTLPEHPNVVKLKASYEDNENVHLV 140          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPK3_ARATH (Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.351e-20
Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 3
Query:  240 QLHDAILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            Q +  IL +  E+V+  Y  GRELGRG+FG+TYL T   T  + ACKSIP R+LV+    +DVRREV++M +LSG  NIV  K AYED   V+++
Sbjct:   61 QQNGRILGRPMEEVRRTYEFGRELGRGQFGVTYLVTHKETKQQVACKSIPTRRLVHKDDIEDVRREVQIMHHLSGHRNIVDLKGAYEDRHSVNLI 155          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.083e-19
Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = 3
Query:  291 YTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            Y LGRELGRGEFGITYLCT+  T    ACKSI KRKL      +DVRREV +M  L   PN+V+ KA YED++ VH+V
Sbjct:   59 YILGRELGRGEFGITYLCTDRETREALACKSISKRKLRTAVDVEDVRREVTIMSTLPEHPNVVKLKATYEDNENVHLV 136          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKC_ARATH (Calcium-dependent protein kinase 12 OS=Arabidopsis thaliana GN=CPK12 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.061e-19
Identity = 43/84 (51.19%), Postives = 63/84 (75.00%), Query Frame = 3
Query:  273 EDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            ++V+ +Y LG+ LG+G+FG T+LCT   TG + ACKSIPKRKL+     DDV RE+++M +LS  PN+V+ ++AYED + VH+V
Sbjct:   16 KNVEDNYFLGQVLGQGQFGTTFLCTHKQTGQKLACKSIPKRKLLCQEDYDDVLREIQIMHHLSEYPNVVRIESAYEDTKNVHLV 99          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKV_ARATH (Calcium-dependent protein kinase 31 OS=Arabidopsis thaliana GN=CPK31 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.350e-18
Identity = 46/96 (47.92%), Postives = 65/96 (67.71%), Query Frame = 3
Query:  237 RQLHDAILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            +Q    IL K + D+   Y LG ELG+G+FGIT  C E ++G  +ACK+I K  L +   ++ V+RE+ +M++LSG+PNIV+FK AYED   VHIV
Sbjct:   10 KQSKRTILEKPFVDIGKVYILGDELGQGQFGITRKCVEKTSGKTYACKTILKTNLKSREDEEAVKREIRIMKHLSGEPNIVEFKKAYEDRDSVHIV 105          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKO_ARATH (Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.131e-18
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 3
Query:  273 EDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            + + L Y LG+ELGRGEFG+T+ C E ST   FACK I K KL  +   +DVRREVE+M+ L   PNIV FK A+ED   V++V
Sbjct:   60 DGIHLKYDLGKELGRGEFGVTHECIEISTRERFACKRISKEKLRTEIDVEDVRREVEIMRCLPKHPNIVSFKEAFEDKDAVYLV 143          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPK_SOYBN (Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.677e-17
Identity = 39/90 (43.33%), Postives = 63/90 (70.00%), Query Frame = 3
Query:  255 ILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            +L +  ++++  Y +GR+LG+G+FG T+ CT  ++G +FACKSIPKRKL+     +DV RE+++M +LS   N+V+ +  YED   VH+V
Sbjct:   22 VLPQRTQNIREVYEVGRKLGQGQFGTTFECTRRASGGKFACKSIPKRKLLCKEDYEDVWREIQIMHHLSEHANVVRIEGTYEDSTAVHLV 111          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKD_ARATH (Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 2.816e-16
Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 3
Query:  273 EDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            E+++  Y L RELGRGEFG+TYLC E S+    ACKSI KRKL      +DV+REV +M++L    +IV  K A EDD  VH+V
Sbjct:   48 ENIEDRYLLDRELGRGEFGVTYLCIERSSRDLLACKSISKRKLRTAVDIEDVKREVAIMKHLPKSSSIVTLKEACEDDNAVHLV 131          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKS_ARATH (Calcium-dependent protein kinase 28 OS=Arabidopsis thaliana GN=CPK28 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.018e-14
Identity = 44/122 (36.07%), Postives = 67/122 (54.92%), Query Frame = 3
Query:  159 SKGQDSDHPAARQLHDKGQDGDYPAARQLHDAILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            +K + +  P   +   K + G  P  ++  D    K + D   HYT+G+ LG G+FG TY+      G   A K + K K+V     +DV+REV+++  LSG  N+VQF  A+EDD +V+IV
Sbjct:   22 TKSKAAPTPIDTKASTKRRTGSIPCGKRT-DFGYSKDFHD---HYTIGKLLGHGQFGYTYVAIHRPNGDRVAVKRLDKSKMVLPIAVEDVKREVQILIALSGHENVVQFHNAFEDDDYVYIV 139          
The following BLAST results are available for this feature:
BLAST of CF504043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CDPK1_ORYSJ2.461e-2060.00Calcium-dependent protein kinase isoform 1 OS=Oryz... [more]
CDPKA_ARATH4.198e-2053.13Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]
CDPK3_ARATH9.351e-2050.53Calcium-dependent protein kinase 3 OS=Arabidopsis ... [more]
CDPKU_ARATH2.083e-1960.26Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CDPKC_ARATH6.061e-1951.19Calcium-dependent protein kinase 12 OS=Arabidopsis... [more]
CDPKV_ARATH1.350e-1847.92Calcium-dependent protein kinase 31 OS=Arabidopsis... [more]
CDPKO_ARATH5.131e-1853.57Calcium-dependent protein kinase 24 OS=Arabidopsis... [more]
CDPK_SOYBN9.677e-1743.33Calcium-dependent protein kinase SK5 OS=Glycine ma... [more]
CDPKD_ARATH2.816e-1652.38Calcium-dependent protein kinase 13 OS=Arabidopsis... [more]
CDPKS_ARATH2.018e-1436.07Calcium-dependent protein kinase 28 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-531 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504043 ID=CF504043; Name=CF504043; organism=Citrus sinensis; type=EST; length=524bp
ATTTTAAAGAATCAATTCAAAGGCAGGAACTGTGATGTGTAGTTGAATAC
ATCTGGGTCCTGCATATTCTTTGAAATTGCCCACCTGCAAAAGTCAAATC
CTGAGGTCCTGTCTCGCATCCTCTGTGCCGGTGGCGGCCAGAAATGGGTT
GCATTTTCAGCAAAGGCCAAGACTCAGACCACCCAGCAGCACGCCAACTC
CATGACAAAGGCCAAGATGGAGACTACCCAGCAGCACGCCAACTCCATGA
TGCAATTCTTTGTAAAGCTTATGAGGATGTTAAGTTACATTATACTCTTG
GTAGAGAATTGGGTAGGGGTGAATTTGGTATAACCTATCTTTGTACTGAG
AATTCAACCGGTTTGGAATTTGCTTGCAAGTCTATTCCTAAAAGAAAGCT
GGTAAATGATTATTATAAGGATGATGTAAGAAGAGAGGTTGAGGTAATGC
AATATTTGAGTGGGCAGCCCAACATAGTCCAATTCAAGGCTGCTTATGAG
GATGACCAATTTGTGCATATTGTT
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