CF504050

Overview
NameCF504050
Unique NameCF504050
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504050 vs. ExPASy Swiss-Prot
Match: MAAI_VIBCH (Probable maleylacetoacetate isomerase OS=Vibrio cholerae GN=maiA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26
Identity = 64/155 (41.29%), Postives = 97/155 (62.58%), Query Frame = 3
Query:   99 LKLYSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVK--GEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANI---VSSSIQPLQNLAVVKYIEEKAGA--DERDIWAKTHIGKGFAALEKLLKDYAG 542
            L LY YWRSS ++RVRI LN+K L YE +AV+L +  GEQ   +F ++NP   +P L+DG+  ++ S AI+ YL+E YP P L+P   +R A  YQ   +   +++ I P+ NL +++Y+  K G   +E++ W +  I KGF  LE+ L+  AG
Sbjct:    4 LILYGYWRSSAAYRVRIALNIKQLVYESRAVHLSREGGEQHHAEFHRLNPSELIPVLIDGELCLNQSLAIIEYLDETYPAPRLIP---ERGAERYQVKALALDIAADIHPINNLRILQYLTAKLGVADEEKNRWYRHWIDKGFQGLEEKLRHTAG 155          
BLAST of CF504050 vs. ExPASy Swiss-Prot
Match: MAAI1_DROME (Probable maleylacetoacetate isomerase 1 OS=Drosophila melanogaster GN=CG9362 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.114e-25
Identity = 62/149 (41.61%), Postives = 92/149 (61.74%), Query Frame = 3
Query:  105 LYSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVK---GEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAG 542
            LYSYW SSCS RVR+ L +K ++Y+ K  +L+K   G  ++ ++ ++NP+  VP+L      + DS AI+ YLEE  PQP LLP D  ++A   +   ++ S IQPLQN++V+ +I    G D+   WA+  I +GF  LEK+L   AG
Sbjct:   36 LYSYWPSSCSWRVRVALAIKKIDYDIKPTSLLKTVSGHAYTDEYREVNPMQKVPSLKIDGHTLCDSVAIIHYLEETRPQPALLPQDPVKRAKIREIVELICSGIQPLQNVSVLDHI----GKDQSLQWAQHWISRGFQGLEKVLSHSAG 180          
BLAST of CF504050 vs. ExPASy Swiss-Prot
Match: MAAI_PSEAE (Maleylacetoacetate isomerase OS=Pseudomonas aeruginosa GN=maiA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.938e-25
Identity = 68/150 (45.33%), Postives = 95/150 (63.33%), Query Frame = 3
Query:   99 LKLYSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVK--GEQFSPDFLKINPIGYVPAL-VDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDI--WAKTHIGKGFAALEKLLKD 533
            +KLY+Y+RS+ S+RVRI L LKGL+Y+   VNL++  GE   P +L +NP G VPAL VD   ++  S AI+ YLEE+YPQP LL SD  R+A     A +V   I PL N +V+  + +  G DE  +  W    +G+G AA+E+L+ D
Sbjct:    1 MKLYTYYRSTSSYRVRIALALKGLDYQSLPVNLIRDGGEHRQPAYLALNPQGRVPALQVDEGELLIQSPAIIEYLEERYPQPALLSSDPLRRARERGVAALVGCDIHPLHNASVLNLLRQ-WGHDEEQVRQWIGHWVGQGLAAVEQLIGD 149          
BLAST of CF504050 vs. ExPASy Swiss-Prot
Match: MAAI_CAEEL (Probable maleylacetoacetate isomerase OS=Caenorhabditis elegans GN=gst-42 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.938e-25
Identity = 66/146 (45.21%), Postives = 91/146 (62.33%), Query Frame = 3
Query:  105 LYSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAG 542
            LYSYWRSSCS RVRI L LK ++YEYK V+L+  E+      +INP   VP  V    V+++S AI+ YLEE +P  PLLP D  ++A     + +V+S IQPL NL V++ + +K  A     +AK  + +G  ALE LLK ++G
Sbjct:    8 LYSYWRSSCSWRVRIALALKNVDYEYKTVDLLS-EEAKSKLKEINPAAKVPTFVVDGQVITESLAIIEYLEETHPDVPLLPKDPIKRAHARAISLLVASGIQPLHNLKVLQLLNKKE-AGFGGQFAKQFVVEGLTALEILLKQHSG 151          
BLAST of CF504050 vs. ExPASy Swiss-Prot
Match: MAAI_EMENI (Maleylacetoacetate isomerase OS=Emericella nidulans GN=maiA PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.335e-19
Identity = 60/157 (38.22%), Postives = 89/157 (56.69%), Query Frame = 3
Query:  105 LYSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV-------DGDFVVSDSFAILMYLEEKYPQ--PPLLP--SDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAG 542
            LY+Y+RSSCS R+RI L L+ + Y    +NL+KGEQ S     +NP   VP L+            ++ S A L YL+E +P    PLLP  S+ +++A+    A+I++  IQP+ NL +++ +    G D R  W+K  I  GFAA E + +D AG
Sbjct:   11 LYTYFRSSCSARLRIALALRSISYTSVPINLLKGEQSSTKNTAVNPSATVPTLIIEHVDRSQSPITITQSLAALEYLDEAFPDNPNPLLPPISNPQQRALVRSLASIIACDIQPVTNLRILQRV-APFGVD-RAAWSKDLIEAGFAAYEAIARDSAG 165          
BLAST of CF504050 vs. ExPASy Swiss-Prot
Match: MAAI_RHIME (Maleylacetoacetate isomerase OS=Rhizobium meliloti GN=maiA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16
Identity = 62/152 (40.79%), Postives = 84/152 (55.26%), Query Frame = 3
Query:   93 NMLKLYSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPAL-VDGDFVVSDSFAILMYLEEKYPQPPLLPS---DLKR-KAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADE--RDIWAKTHIGKGFAALEKLL 527
            N   LY YWRSS S+RVRI LNL G  Y    V+L+     +P+ L  NP G VP L +DG+  ++ S AI+ YL E      LLP+   D +R +A++Y     V+  I P+ NL VV  +   AG  E  R  W +  IG+G AA E++L
Sbjct:    3 NETVLYDYWRSSASYRVRIALNLCGEAYRSVPVDLLAKAHRAPEHLARNPQGLVPVLDIDGE-RLTQSLAIIEYLAETRDGTGLLPAHPIDRQRVRALSY----AVAMDIHPVCNLGVVARVMAGAGDGEAARREWMQKFIGEGLAAFERML 149          
BLAST of CF504050 vs. ExPASy Swiss-Prot
Match: GSTA_RHILE (Protein gstA OS=Rhizobium leguminosarum GN=gstA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.664e-13
Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = 3
Query:   99 LKLYSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSD 353
            +KLY +  S  +HR  + L+L G+ YE   V+L  G   +PDFLK+NP G VP L D   V++DS AIL+YL  KY +   LP +
Sbjct:    1 MKLYHHPLSGHAHRAHLFLSLLGVPYELVEVDLAAGAHKAPDFLKLNPFGQVPVLDDNGTVIADSSAILVYLARKYGRTDWLPEE 85          
BLAST of CF504050 vs. ExPASy Swiss-Prot
Match: GSTT7_DROME (Glutathione S-transferase D7 OS=Drosophila melanogaster GN=GstD7 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.772e-12
Identity = 36/93 (38.71%), Postives = 58/93 (62.37%), Query Frame = 3
Query:   99 LKLYSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKY--PQPPLLPSDLKRKAI 371
            L LY++  +  S  +++     GLE   K +N ++G+Q  P+F++INP   +P LVD  FV+ +S AI +YL EKY  P  PL P+D +++A+
Sbjct:    4 LDLYNFPMAPASRAIQMVAKALGLELNSKLINTMEGDQLKPEFVRINPQHTIPTLVDNGFVIWESRAIAVYLVEKYGKPDSPLYPNDPQKRAL 96          
BLAST of CF504050 vs. ExPASy Swiss-Prot
Match: GSTT3_DROME (Glutathione S-transferase D3 OS=Drosophila melanogaster GN=GstD3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.157e-12
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 3
Query:  165 GLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKY-PQPPLLPSDLKRKAI 371
            GLE+  K +N +KGEQ +PDF+KINP   +P LVD  F + +S AIL+YL EKY     L P D++++A+
Sbjct:    7 GLEFNKKIINTLKGEQMNPDFIKINPQHSIPTLVDNGFTIWESRAILVYLVEKYGKDDALYPKDIQKQAV 76          
BLAST of CF504050 vs. ExPASy Swiss-Prot
Match: SSPA_HAEDU (Stringent starvation protein A homolog OS=Haemophilus ducreyi GN=sspA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.343e-11
Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 3
Query:   93 NMLKLYSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLP 347
            +++ L+S      SH+VRI L  KG+ YE + +N       S DFL++NP   +P LVD D V+ +S  I+ YL+E++P PPL+P
Sbjct:    9 SVMSLFSDKNDIYSHQVRIVLAEKGVPYELENIN---PNTISEDFLELNPYANIPTLVDRDLVLFNSRIIMEYLDERFPHPPLMP 90          
The following BLAST results are available for this feature:
BLAST of CF504050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
MAAI_VIBCH4.804e-2641.29Probable maleylacetoacetate isomerase OS=Vibrio ch... [more]
MAAI1_DROME3.114e-2541.61Probable maleylacetoacetate isomerase 1 OS=Drosoph... [more]
MAAI_PSEAE6.938e-2545.33Maleylacetoacetate isomerase OS=Pseudomonas aerugi... [more]
MAAI_CAEEL6.938e-2545.21Probable maleylacetoacetate isomerase OS=Caenorhab... [more]
MAAI_EMENI3.335e-1938.22Maleylacetoacetate isomerase OS=Emericella nidulan... [more]
MAAI_RHIME5.887e-1640.79Maleylacetoacetate isomerase OS=Rhizobium meliloti... [more]
GSTA_RHILE4.664e-1344.71Protein gstA OS=Rhizobium leguminosarum GN=gstA PE... [more]
GSTT7_DROME1.772e-1238.71Glutathione S-transferase D7 OS=Drosophila melanog... [more]
GSTT3_DROME5.157e-1248.57Glutathione S-transferase D3 OS=Drosophila melanog... [more]
SSPA_HAEDU3.343e-1141.18Stringent starvation protein A homolog OS=Haemophi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-538 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504050 ID=CF504050; Name=CF504050; organism=Citrus sinensis; type=EST; length=574bp
CTTTGCTGATTATAAGAAGGCAGAAGTGTTAGGTCAGTCTCTTCAATCTG
CAGTGCTTGTGTAGTCTGGTCAGAGACAGAACCTGTTGATAAAACATGCT
GAAACTGTATTCATACTGGAGGAGTTCATGCTCACATCGTGTCAGAATTG
GTCTCAACTTGAAAGGGTTAGAATATGAGTACAAAGCAGTTAACTTGGTG
AAAGGAGAGCAATTCAGTCCTGATTTTTTGAAGATCAACCCTATTGGCTA
TGTGCCGGCTTTGGTTGATGGAGATTTTGTTGTATCTGATTCTTTTGCCA
TTTTAATGTACCTGGAAGAGAAGTATCCTCAGCCTCCATTGTTGCCTTCT
GATCTTAAGAGAAAAGCTATCAATTATCAGGCTGCAAATATTGTTTCCTC
GAGCATACAGCCTCTTCAGAATCTTGCAGTAGTGAAGTACATTGAGGAAA
AAGCTGGTGCAGATGAGAGAGATATCTGGGCTAAAACTCACATTGGAAAA
GGCTTTGCGGCACTTGAGAAGCTGCTAAAAGACTATGCTGGGAATATGCA
ACTGGAGATGAAGTTTCCTGGCAG
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