CF504128
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504128 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.411e-17 Identity = 45/88 (51.14%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 137 TGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG-------DGP 379 +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FP F +G++ RKREIAAF AQ + + G DGP Sbjct: 65 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGP 152
BLAST of CF504128 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.842e-17 Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 104 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARG-FYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLGDGP 379 C SG G G GG++G +IS MF+ +L +RND C + FY+Y+AFI AA++F GFG +G+ T RKREIAAFFAQ + + G P Sbjct: 58 CPSGPSPKPPTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWP 150
BLAST of CF504128 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.406e-17 Identity = 46/93 (49.46%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 104 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARG-FYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLGDGP 379 CG G C + G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FPGFG +G+ T RKREIAAFFAQ + + G P Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWP 140
BLAST of CF504128 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.406e-17 Identity = 44/103 (42.72%), Postives = 57/103 (55.34%), Query Frame = 2 Query: 89 GSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG------DGP 379 G C G G G + I+SR +F+ +L +RNDA CPA+ FYTYDAF+ AA AFP F +G+ RKRE+AAF AQ + + G DGP Sbjct: 54 GCQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGP 156
BLAST of CF504128 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.143e-17 Identity = 43/83 (51.81%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 146 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG-----DGP 379 GT +G I++ ++F+ +L RNDARC A FYTYDAFI AA +FPGFG +G++T RK+EIAAFF Q + + G DGP Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTLSPDGP 102
BLAST of CF504128 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 87.0409 bits (214), Expect = 3.143e-17 Identity = 46/104 (44.23%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 89 GSAQNCGSGVVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG 370 GS CG G C + +G G + GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AF GFG +G RKRE+AAF AQ + + G Sbjct: 44 GSTPYCGDG--CQSQCSGCGGGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTG 145
BLAST of CF504128 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.105e-17 Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 2 Query: 155 GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG 370 GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AFPGFG +G+ RKRE+AAF AQ + + G Sbjct: 77 GGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTG 148
BLAST of CF504128 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.361e-17 Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 2 Query: 170 KIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLGDGP 379 KIISR MF+ +L +RN+ CPA+GFYTYDAF+ AA++FP FG +G+ +RKRE+AAF Q + + G P Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWP 73
BLAST of CF504128 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.001e-17 Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 2 Query: 146 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG 370 GT G + I+SR F+ +L +RND C A+GFYTYDAF+ AA AFPGFG +G+ +KRE+AAF AQ + + G Sbjct: 19 GTARGSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTG 93
BLAST of CF504128 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.037e-16 Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 146 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG 370 GT G + IIS F+ +L +RND C A+GFYTYDAF+ AA AFPGFG +G+ RKR++AAF AQ + + G Sbjct: 19 GTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTG 93 The following BLAST results are available for this feature:
BLAST of CF504128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504128 ID=CF504128; Name=CF504128; organism=Citrus sinensis; type=EST; length=412bpback to top |