CF504130

Overview
NameCF504130
Unique NameCF504130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig521 contig Csv1_Contig521:1..472. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_SCLS1 (ATP-dependent RNA helicase drs1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=drs1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.026e-23
Identity = 54/120 (45.00%), Postives = 75/120 (62.50%), Query Frame = 3
Query:    9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA---GSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVK 359
            Y+HRVGRTARAGR G A T   + DR ++KA  K +   G+K+ SR++       WS+ +++M D++  IL+      IL +AEME  K +N + H+ EI  RPKRTWF +EKEK  A K
Sbjct:  597 YLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASRTQGAKVVSRVIEASEADSWSEKVDEMADEIEEILKEEKEDKILAQAEMEVRKGQNFMDHEAEIKGRPKRTWFESEKEKLAAKK 716          
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_NEOFI (ATP-dependent RNA helicase drs1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=drs1 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.259e-23
Identity = 53/120 (44.17%), Postives = 76/120 (63.33%), Query Frame = 3
Query:    9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA---GSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVK 359
            Y+HRVGRTARAGR G A T   + DR ++K+  K     G+K+ SR+V      +W+   + +ED++  +LQ       + +AEM+ TK ENMI H+ EI +RPKRTWF TE++K+ A K
Sbjct:  628 YLHRVGRTARAGRSGRACTIAAEPDRKIVKSAVKAGKAQGAKIVSRVVDPAVADEWAAKAKGLEDEIEEVLQEEKLEKQMAQAEMQVTKGENMIKHEAEIMSRPKRTWFETERDKRAARK 747          
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_ASPFU (ATP-dependent RNA helicase drs1 OS=Aspergillus fumigatus GN=drs1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.172e-22
Identity = 52/120 (43.33%), Postives = 76/120 (63.33%), Query Frame = 3
Query:    9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA---GSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVK 359
            Y+HRVGRTARAGR G A T   + DR ++K+  K     G+K+ SR+V      +W+   + +ED++  +LQ       + +AEM+ TK EN+I H+ EI +RPKRTWF TE++K+ A K
Sbjct:  639 YLHRVGRTARAGRSGRACTIAAEPDRKIVKSAVKAGKAQGAKIVSRVVDPAVADEWAAKAKGLEDEIEEVLQEEKLEKQMAQAEMQVTKGENLIKHEAEIMSRPKRTWFETERDKRAARK 758          
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_ASPCL (ATP-dependent RNA helicase drs1 OS=Aspergillus clavatus GN=drs1 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.530e-22
Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 3
Query:    9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIA---KRAGSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVK 359
            Y+HRVGRTARAGR G A T   D DR ++KA     K  G+K+ SR+V      +W+  +E +E+++  +L+       + +AEM+ TK EN++ H  EI +RPKRTWF TE++K+ + K
Sbjct:  635 YLHRVGRTARAGRSGRACTIAADPDRKVVKAAVRAGKAQGAKIASRVVEPAVADQWAAKVEALEEEIEEVLKEEKLEKHMAQAEMQVTKGENLMKHGAEIMSRPKRTWFETERDKRASRK 754          
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_USTMA (ATP-dependent RNA helicase DRS1 OS=Ustilago maydis GN=DRS1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.998e-22
Identity = 57/126 (45.24%), Postives = 77/126 (61.11%), Query Frame = 3
Query:    6 SYVHRVGRTARAGREGYAVTFVTDNDRSLLK-AIAKRAGSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASIE 380
            +Y+HRVGRTARAGR G AVT V + DR +LK AI K +  ++K RI+         + +E+++ +V A+L+       LR AEME  K ENM  H +EIF+RPKRTWF +  EK  A    KA  +
Sbjct:  694 AYLHRVGRTARAGRNGRAVTLVGEADRRMLKLAIKKSSAEQIKHRIIPSAVAAHMCETLERLKPEVDAVLREEKEEKALRIAEMELKKGENMANHADEIFSRPKRTWFQSGSEKTQASALSKAGYQ 819          
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_COCIM (ATP-dependent RNA helicase DRS1 OS=Coccidioides immitis GN=DRS1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.998e-22
Identity = 59/144 (40.97%), Postives = 83/144 (57.64%), Query Frame = 3
Query:    9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA---GSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASI---------EKGKGSGNE 404
            Y+HRVGRTARAGR G A T   + DR ++KA  K     G+K+ SR+V      +W+  +E+M+ ++  IL+       L +AEM+  + +N+I H  EI ARPKRTWF TE+EK+ A K   + +         EK K SG E
Sbjct:  648 YLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKAGRAQGAKIVSRVVDPAVADEWASKVEEMQAEIEDILKEEKEEKQLAQAEMQVKRGQNLIKHGSEIMARPKRTWFETEREKREAKKRALSELNGPDSVIKKEKRKLSGKE 791          
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_GIBZE (ATP-dependent RNA helicase DRS1 OS=Gibberella zeae GN=DRS1 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.443e-20
Identity = 56/151 (37.09%), Postives = 85/151 (56.29%), Query Frame = 3
Query:    9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA---GSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASI-----EKGKGSGNEVTSAQQAEDLK 437
            YVHRVGRTARAGR+G A+T   ++DR ++KA  K     G+K+ SR +    +      I++M+D++  I++       L   EM+  K ENMI H+ EI  RP+RTWF +E +KK + +A +  +     E  K +G      ++  DLK
Sbjct:  585 YVHRVGRTARAGRKGVALTIAAESDRKVVKAAVKAGKAQGAKIVSRQLDSGEVDALQTQIDEMDDEIDEIMEEEKEEKQLAHVEMQVKKGENMIQHEAEIKGRPRRTWFESEHDKKKSKQAGRDELNGMREEMKKKTGKLSNKDKKRLDLK 735          
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_CANGA (ATP-dependent RNA helicase DRS1 OS=Candida glabrata GN=DRS1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.190e-20
Identity = 60/145 (41.38%), Postives = 82/145 (56.55%), Query Frame = 3
Query:    9 YVHRVGRTARAGREGYAVTFVTDN--DRSLLKAIAKRA------GSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKL-----AVKADKASIEKGKGSGNE 404
            Y+HRVGRTARAGREG ++TFV +   +RS++K   +        GSK   R V    + + +KI+E M+  V  IL        + +AEME  K EN++ HK+EI +RPKRTWF +EKEKK      A+   K  +   K   NE
Sbjct:  538 YLHRVGRTARAGREGRSITFVGEASAERSIVKDAIRGVNDSEIPGSKAVGRNVDWNQVEETNKIVENMDQTVQDILVEEKEEKEILRAEMELKKGENLLKHKDEIQSRPKRTWFQSEKEKKNSKIMGALSKTKKEVNSKKRKRNE 682          
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_PICGU (ATP-dependent RNA helicase DRS1 OS=Pichia guilliermondii GN=DRS1 PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 5.442e-20
Identity = 50/121 (41.32%), Postives = 80/121 (66.12%), Query Frame = 3
Query:    9 YVHRVGRTARAGREGYAVTFV--TDNDRSL----LKAIAKRAGSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLA 353
            Y+HRVGRTARAGREG ++TFV  ++ DRS+    +K++ ++   K  SR V  + + + + I+E  +D +  +L+       + +AEM+  KA N++ H++EI +RPKRTWF +E+EKK A
Sbjct:  531 YLHRVGRTARAGREGRSITFVGESNQDRSIVKDAIKSLEEQKNGKAVSRTVDWKKVEELNSIVESKKDTIDEVLEEEKSAKEILQAEMQLEKASNIMKHEKEIHSRPKRTWFQSEQEKKQA 651          
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_VANPO (ATP-dependent RNA helicase DRS1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DRS1 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 9.283e-20
Identity = 59/138 (42.75%), Postives = 85/138 (61.59%), Query Frame = 3
Query:    9 YVHRVGRTARAGREGYAVTFVTDN--DRSLLKAIAKR-----AGSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASIEKGKGSGN 401
            Y+HRVGRTARAGREG +VTFV ++  DRS++++  K      + +K  SR V    I + +K++E   + +  IL        + +AEM+  K ENMI HK+EI +RPKRTWF +E EKK A   D  +++K K + N
Sbjct:  563 YLHRVGRTARAGREGRSVTFVGESSQDRSIVRSAIKSVEESSSKNKAVSRNVEWTQIEETNKLVESFGETIDDILVEEKQEKEILRAEMQLRKGENMIKHKKEIQSRPKRTWFQSEAEKKNAKILD--TLQKNKKTVN 698          
The following BLAST results are available for this feature:
BLAST of CF504130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
DRS1_SCLS14.026e-2345.00ATP-dependent RNA helicase drs1 OS=Sclerotinia scl... [more]
DRS1_NEOFI5.259e-2344.17ATP-dependent RNA helicase drs1 OS=Neosartorya fis... [more]
DRS1_ASPFU1.172e-2243.33ATP-dependent RNA helicase drs1 OS=Aspergillus fum... [more]
DRS1_ASPCL1.530e-2242.50ATP-dependent RNA helicase drs1 OS=Aspergillus cla... [more]
DRS1_USTMA1.998e-2245.24ATP-dependent RNA helicase DRS1 OS=Ustilago maydis... [more]
DRS1_COCIM1.998e-2240.97ATP-dependent RNA helicase DRS1 OS=Coccidioides im... [more]
DRS1_GIBZE2.443e-2037.09ATP-dependent RNA helicase DRS1 OS=Gibberella zeae... [more]
DRS1_CANGA3.190e-2041.38ATP-dependent RNA helicase DRS1 OS=Candida glabrat... [more]
DRS1_PICGU5.442e-2041.32ATP-dependent RNA helicase DRS1 OS=Pichia guillier... [more]
DRS1_VANPO9.283e-2042.75ATP-dependent RNA helicase DRS1 OS=Vanderwaltozyma... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-618 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504130 ID=CF504130; Name=CF504130; organism=Citrus sinensis; type=EST; length=472bp
TTACTAGCTATGTTCATCGAGTGGGACGTACAGCAAGAGCTGGTAGAGAG
GGATATGCTGTTACTTTTGTGACGGACAATGATCGTTCTCTTTTAAAAGC
CATTGCTAAGAGAGCTGGTTCCAAGTTGAAGAGCCGAATCGTCGCCGAGC
AATCAATTACTAAGTGGTCTAAAATAATTGAACAAATGGAAGATCAAGTA
GCTGCTATTCTTCAAGAAGAAAGGGAAGAGAGAATCCTGAGAAAAGCTGA
AATGGAAGCAACAAAGGCAGAAAATATGATTGCTCATAAGGAAGAAATTT
TTGCACGCCCTAAAAGAACTTGGTTTGTGACAGAAAAGGAGAAAAAGCTT
GCAGTAAAGGCAGATAAGGCATCTATTGAAAAAGGAAAAGGGTCTGGAAA
TGAGGTGACAAGTGCTCAACAGGCTGAAGACCTTAAAATAAAGGAAAAGA
GGAAGCGAGAACGTGAGAAAAA
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