CF504141
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS11_MOUSE (40S ribosomal protein S11 OS=Mus musculus GN=Rps11 PE=2 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 5.911e-41 Identity = 77/131 (58.78%), Postives = 98/131 (74.81%), Query Frame = 1 Query: 91 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLS 480 QTE+A+ KQP +F + R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLS Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLS 135
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS11_MACFA (40S ribosomal protein S11 OS=Macaca fascicularis GN=RPS11 PE=2 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 5.911e-41 Identity = 77/131 (58.78%), Postives = 98/131 (74.81%), Query Frame = 1 Query: 91 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLS 480 QTE+A+ KQP +F + R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLS Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLS 135
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS11_HUMAN (40S ribosomal protein S11 OS=Homo sapiens GN=RPS11 PE=1 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 5.911e-41 Identity = 77/131 (58.78%), Postives = 98/131 (74.81%), Query Frame = 1 Query: 91 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLS 480 QTE+A+ KQP +F + R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLS Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLS 135
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS11_BOVIN (40S ribosomal protein S11 OS=Bos taurus GN=RPS11 PE=2 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 5.911e-41 Identity = 77/131 (58.78%), Postives = 98/131 (74.81%), Query Frame = 1 Query: 91 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLS 480 QTE+A+ KQP +F + R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLS Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLS 135
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS11_SCHPO (40S ribosomal protein S11 OS=Schizosaccharomyces pombe GN=rps11a PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 2.246e-40 Identity = 78/130 (60.00%), Postives = 94/130 (72.31%), Query Frame = 1 Query: 91 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 480 Q+E+AF KQP +F ++ R++K +GLGFKTP EAI G Y+DKKCPF G VSIRGRIL GT S KM+RTII+RR YLHF+ KY RYEKRH N+ AH+SP FR+ EGD V +GQCRPLS Sbjct: 8 QSERAFQKQPHIFQNAKKGAG--------RRWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRINEGDVVTVGQCRPLS 129
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS11_YEAST (40S ribosomal protein S11 OS=Saccharomyces cerevisiae GN=RPS11A PE=1 SV=3) HSP 1 Score: 162.54 bits (410), Expect = 8.535e-40 Identity = 76/130 (58.46%), Postives = 96/130 (73.85%), Query Frame = 1 Query: 91 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 480 Q+E+AF KQP +F + R++K+ GLGFKTP+ AIEG+YIDKKCPFTG VSIRG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+ GD V +GQCRP+S Sbjct: 8 QSERAFQKQPHIFNNPKVKTSKRT-----KRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVTVGQCRPIS 132
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS11_DROPS (40S ribosomal protein S11 OS=Drosophila pseudoobscura pseudoobscura GN=RpS11 PE=3 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 4.383e-36 Identity = 77/134 (57.46%), Postives = 93/134 (69.40%), Query Frame = 1 Query: 82 MAEQTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLS 480 MA+Q E+AF KQ V L+ R ++ +GLGFKTPREAI+GTYIDKKCP+TG V IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V IG+CRPLS Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGVTKKKIL--RRYRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILIGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDVEHGDIVTIGECRPLS 132
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS11_DROYA (40S ribosomal protein S11 OS=Drosophila yakuba GN=RpS11 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 5.725e-36 Identity = 78/134 (58.21%), Postives = 93/134 (69.40%), Query Frame = 1 Query: 82 MAEQTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLS 480 MA+Q E+AF KQ V L+ R + +GLGFKTPREAI+GTYIDKKCP+TG V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V IG+CRPLS Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGITKKKLL--RRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLS 132
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS11_DROME (40S ribosomal protein S11 OS=Drosophila melanogaster GN=RpS11 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 5.725e-36 Identity = 78/134 (58.21%), Postives = 93/134 (69.40%), Query Frame = 1 Query: 82 MAEQTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLS 480 MA+Q E+AF KQ V L+ R + +GLGFKTPREAI+GTYIDKKCP+TG V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V IG+CRPLS Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGITKKKLL--RRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLS 132
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS11_ANOGA (40S ribosomal protein S11 OS=Anopheles gambiae GN=RpS11 PE=2 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 7.477e-36 Identity = 68/101 (67.33%), Postives = 82/101 (81.19%), Query Frame = 1 Query: 181 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLS 480 R SIGLGFKTP+EAI GTYIDKKCPFTG +SIRGRIL G KM+RTI++RR+YLHF++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLS Sbjct: 30 RMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISIRGRILTGVVRKMKMHRTIVIRRDYLHFIRKYDRFEKRHRNMSVHLSPCFRDVEAGDIVTVGECRPLS 130 The following BLAST results are available for this feature:
BLAST of CF504141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504141 ID=CF504141; Name=CF504141; organism=Citrus sinensis; type=EST; length=481bpback to top |