CF504285

Overview
NameCF504285
Unique NameCF504285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length390
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12594 contig Csv1_Contig12594:72..460. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.113e-37
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGFTSADVGLDA
Sbjct:   17 DKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRGIGFTSADVGLDA 87

HSP 2 Score: 34.6538 bits (78), Expect = 5.113e-37
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            METFLFTSESVNEGH
Sbjct:    1 METFLFTSESVNEGH 15
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.113e-37
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGFTSADVGLDA
Sbjct:   17 DKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRGIGFTSADVGLDA 87

HSP 2 Score: 34.6538 bits (78), Expect = 5.113e-37
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            METFLFTSESVNEGH
Sbjct:    1 METFLFTSESVNEGH 15
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.113e-37
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGFTSADVGLDA
Sbjct:   17 DKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRGIGFTSADVGLDA 87

HSP 2 Score: 34.6538 bits (78), Expect = 5.113e-37
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            METFLFTSESVNEGH
Sbjct:    1 METFLFTSESVNEGH 15
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK1_ORYSJ (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. japonica GN=SAM1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.659e-37
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDAVLDACLA+DPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVR+TCR+IGF SADVGLDA
Sbjct:   20 DKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDA 90

HSP 2 Score: 32.3426 bits (72), Expect = 6.659e-37
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            ++TFLFTSESVNEGH
Sbjct:    4 LDTFLFTSESVNEGH 18
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK1_ORYSI (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. indica GN=SAM1 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 6.659e-37
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDAVLDACLA+DPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVR+TCR+IGF SADVGLDA
Sbjct:   20 DKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDA 90

HSP 2 Score: 32.3426 bits (72), Expect = 6.659e-37
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            ++TFLFTSESVNEGH
Sbjct:    4 LDTFLFTSESVNEGH 18
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.660e-37
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA++DYEKIVRDTCR+IGF S DVGLDA
Sbjct:   17 DKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADIDYEKIVRDTCRTIGFVSDDVGLDA 87

HSP 2 Score: 34.6538 bits (78), Expect = 6.660e-37
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            METFLFTSESVNEGH
Sbjct:    1 METFLFTSESVNEGH 15
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.660e-37
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCR IGF S DVGLDA
Sbjct:   17 DKLCDQISDAVLDACLQQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCREIGFVSDDVGLDA 87

HSP 2 Score: 34.6538 bits (78), Expect = 6.660e-37
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            METFLFTSESVNEGH
Sbjct:    1 METFLFTSESVNEGH 15
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 8.676e-37
Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDAVLDACLAQDP+SKVACETCTKTN+VMVFGEITTKAN+DYEKIVRDTCR IGF S DVGLDA
Sbjct:   17 DKLCDQVSDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANIDYEKIVRDTCREIGFVSPDVGLDA 87

HSP 2 Score: 34.6538 bits (78), Expect = 8.676e-37
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            METFLFTSESVNEGH
Sbjct:    1 METFLFTSESVNEGH 15
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.130e-36
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDAVLDACLA+DPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCR IGF S DVGLDA
Sbjct:   20 DKLCDQISDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFVSNDVGLDA 90

HSP 2 Score: 33.113 bits (74), Expect = 1.130e-36
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            +ETFLFTSESVNEGH
Sbjct:    4 VETFLFTSESVNEGH 18
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.130e-36
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDA+LDACL QDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVR TCRSIGF S DVGLDA
Sbjct:   17 DKLCDQVSDAILDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRSTCRSIGFVSDDVGLDA 87

HSP 2 Score: 34.6538 bits (78), Expect = 1.130e-36
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            METFLFTSESVNEGH
Sbjct:    1 METFLFTSESVNEGH 15
The following BLAST results are available for this feature:
BLAST of CF504285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_TOBAC5.113e-3792.96S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK1_TOBAC5.113e-3792.96S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_PETHY5.113e-3792.96S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK1_ORYSJ6.659e-3794.37S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_ORYSI6.659e-3794.37S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK5_VITVI6.660e-3791.55S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK2_VITVI6.660e-3792.96S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK2_SOLLC8.676e-3791.55S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]
METK4_HORVU1.130e-3692.96S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]
METK2_POPTR1.130e-3692.96S-adenosylmethionine synthetase 2 OS=Populus trich... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-774 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504285 ID=CF504285; Name=CF504285; organism=Citrus sinensis; type=EST; length=390bp
CGTCTTTCTCTCGTTCTTCTGGGTACTTACCATTTTCGTATATCACCACC
TTCAATTCCATTTGTACTCGCACCACGGCCTCCTGCAAAGCGAAAGCTGC
AGCTTCAGGTTAAATCAAATTAAAGAAAATGGAAACATTTCTTTTCACAT
CAGAATCAGTGAACGAGGGTCACCTCGGACAAGCTGTGTGACCAAGTTTC
GGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGACAGCAAAGTTG
CTTGTGAAACATGCACAAAGACCAACATGGTCATGGTTTTTGGAGAAATT
ACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTGATACATGCAG
ATCGATTGGGTTCACATCGGCCGATGTGGGGCTTGATGCT
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