CF504285

Overview
NameCF504285
Unique NameCF504285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length390
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12594 contig Csv1_Contig12594:72..460. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_DENCR (S-adenosylmethionine synthetase OS=Dendrobium crumenatum GN=SAMS PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.590e-35
Identity = 63/71 (88.73%), Postives = 68/71 (95.77%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDA+LDACL QDPDSKVACETC+KTNMVM+FGEITTKANVDYEKIVRDTCR+IGF S DVGLDA
Sbjct:   20 DKLCDQISDAILDACLEQDPDSKVACETCSKTNMVMIFGEITTKANVDYEKIVRDTCRAIGFVSDDVGLDA 90          

HSP 2 Score: 31.9574 bits (71), Expect = 1.590e-35
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 3
Query:  129 METFLFTSESVNEGH 173
            ++TFLFTSESVNEGH
Sbjct:    4 VDTFLFTSESVNEGH 18          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.590e-35
Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDAVLDACL QDP+SKVACETCTKTN+VMVFGEITTKANVDYEKIVRDTCR+IGF S DVGLDA
Sbjct:   18 DKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRNIGFISNDVGLDA 88          

HSP 2 Score: 32.7278 bits (73), Expect = 1.590e-35
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  132 ETFLFTSESVNEGH 173
            ETFLFTSESVNEGH
Sbjct:    3 ETFLFTSESVNEGH 16          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.590e-35
Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKA V+YEKIVRDTCR IGF SADVGLDA
Sbjct:   17 DKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFVSADVGLDA 87          

HSP 2 Score: 33.4982 bits (75), Expect = 1.590e-35
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 3
Query:  129 METFLFTSESVNEGH 173
            M+TFLFTSESVNEGH
Sbjct:    1 MDTFLFTSESVNEGH 15          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.590e-35
Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA+VDYE+IVR TCR IGF S DVGLDA
Sbjct:   17 DKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEQIVRKTCREIGFISDDVGLDA 87          

HSP 2 Score: 34.6538 bits (78), Expect = 1.590e-35
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3
Query:  129 METFLFTSESVNEGH 173
            METFLFTSESVNEGH
Sbjct:    1 METFLFTSESVNEGH 15          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.071e-35
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDAVLDACLAQD DSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGF S DVGLDA
Sbjct:   19 DKLCDQVSDAVLDACLAQDADSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRNIGFISDDVGLDA 89          

HSP 2 Score: 32.7278 bits (73), Expect = 2.071e-35
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  132 ETFLFTSESVNEGH 173
            ETFLFTSESVNEGH
Sbjct:    4 ETFLFTSESVNEGH 17          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.071e-35
Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKA V+YEKIVRDTCR IGFTS DVGLDA
Sbjct:   17 DKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFTSPDVGLDA 87          

HSP 2 Score: 33.113 bits (74), Expect = 2.071e-35
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 3
Query:  129 METFLFTSESVNEGH 173
            ME+FLFTSESVNEGH
Sbjct:    1 MESFLFTSESVNEGH 15          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.697e-35
Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDAVLDACLAQDP+SKVACETCTKTN+VMVFGEITTKA+VDYEKIVR TCR IGF SADVGLDA
Sbjct:   21 DKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKADVDYEKIVRQTCRDIGFVSADVGLDA 91          

HSP 2 Score: 31.9574 bits (71), Expect = 2.697e-35
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 3
Query:  129 METFLFTSESVNEGH 173
            ++TFLFTSESVNEGH
Sbjct:    5 VDTFLFTSESVNEGH 19          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.697e-35
Identity = 63/71 (88.73%), Postives = 67/71 (94.37%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKANVDYE+IVR TCR IGF SADVGLDA
Sbjct:   17 DKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEQIVRKTCREIGFVSADVGLDA 87          

HSP 2 Score: 33.113 bits (74), Expect = 2.697e-35
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 3
Query:  129 METFLFTSESVNEGH 173
            ME+FLFTSESVNEGH
Sbjct:    1 MESFLFTSESVNEGH 15          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.697e-35
Identity = 63/71 (88.73%), Postives = 67/71 (94.37%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKANVDYEKIVR+TCR IGF S DVGLDA
Sbjct:   17 DKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCREIGFISDDVGLDA 87          

HSP 2 Score: 33.113 bits (74), Expect = 2.697e-35
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 3
Query:  129 METFLFTSESVNEGH 173
            ME+FLFTSESVNEGH
Sbjct:    1 MESFLFTSESVNEGH 15          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.513e-35
Identity = 63/71 (88.73%), Postives = 67/71 (94.37%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DK+CDQ+SDAVLDACLAQDP+SKVACETCTKTN+VMVFGEITTK NVDYEKIVR TCR IGF SADVGLDA
Sbjct:   21 DKMCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKGNVDYEKIVRQTCRDIGFVSADVGLDA 91          

HSP 2 Score: 31.9574 bits (71), Expect = 3.513e-35
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 3
Query:  129 METFLFTSESVNEGH 173
            ++TFLFTSESVNEGH
Sbjct:    5 IDTFLFTSESVNEGH 19          
The following BLAST results are available for this feature:
BLAST of CF504285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DENCR1.590e-3588.73S-adenosylmethionine synthetase OS=Dendrobium crum... [more]
METK_PHALU1.590e-3590.14S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]
METK1_VITVI1.590e-3590.14S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK_PINBN1.590e-3590.14S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK1_TRIMO2.071e-3592.96S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK2_ACTCH2.071e-3590.14S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]
METK2_ATRNU2.697e-3590.14S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK4_ARATH2.697e-3588.73S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK2_BRAJU2.697e-3588.73S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK1_BETVU3.513e-3588.73S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-774 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504285 ID=CF504285; Name=CF504285; organism=Citrus sinensis; type=EST; length=390bp
CGTCTTTCTCTCGTTCTTCTGGGTACTTACCATTTTCGTATATCACCACC
TTCAATTCCATTTGTACTCGCACCACGGCCTCCTGCAAAGCGAAAGCTGC
AGCTTCAGGTTAAATCAAATTAAAGAAAATGGAAACATTTCTTTTCACAT
CAGAATCAGTGAACGAGGGTCACCTCGGACAAGCTGTGTGACCAAGTTTC
GGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGACAGCAAAGTTG
CTTGTGAAACATGCACAAAGACCAACATGGTCATGGTTTTTGGAGAAATT
ACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTGATACATGCAG
ATCGATTGGGTTCACATCGGCCGATGTGGGGCTTGATGCT
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