CF831916

Overview
NameCF831916
Unique NameCF831916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:247..1005. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831916 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 3.986e-26
Identity = 69/154 (44.81%), Postives = 95/154 (61.69%), Query Frame = -2
Query:  351 GDQKLFESRAITQYIAQEFPDKGTQLTCPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK--LFDARPHVSAWAADITSRPAWAKVLA 797
            GD K+FESRAI +YIA+++  +G  L   GK I     +  W +VEA  + PP   L   +V+ P+ G   D   ++E+E KLA++LDVYEA+LS+++YLA D  +L DL HLP    L+G P+ K  L   R HVSAW   I+SR AW +V A
Sbjct:   59 GDYKIFESRAIMRYIAEKYRSQGPDLL--GKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVG-PIGKAHLIKDRKHVSAWWDKISSRAAWKEVSA 209          
BLAST of CF831916 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.675e-24
Identity = 64/154 (41.56%), Postives = 92/154 (59.74%), Query Frame = -2
Query:  345 GDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKP-MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALL 797
            GD  LFESRAI +YI +++  +   L   G  +  A + VW EVE  Q++   S + +E +  P M G+ T+   V+E+  KL K+L+VYEARLSQS YLA D  +  DL+H P     +GTP   LFD+ PHV AW   + +RP+  K+ A++
Sbjct:   61 GDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAAVM 214          
BLAST of CF831916 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 111.694 bits (278), Expect = 4.873e-24
Identity = 66/154 (42.86%), Postives = 92/154 (59.74%), Query Frame = -2
Query:  342 GDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 797
            GD  LFESRAI +Y A++      +L   G  +  A + VW EVEA Q+    + + ++++  PM G TTD   V+EN  KL K+L+VYEARL++ KYLA D  +L DL+H+     L  TP   + DA PHV AW + +  RP+  KV AL+K
Sbjct:   61 GDLYLFESRAICKYAARK---NKPELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of CF831916 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.037e-23
Identity = 63/154 (40.91%), Postives = 90/154 (58.44%), Query Frame = -2
Query:  348 GDQKLFESRAITQYIAQEFPDKGTQL---TCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLG-TPVKKLFDARPHVSAWAADITSRPAWAKVLAL 797
            G  KLFESRAI +Y A ++ D+GT L   T  G+ I     W EVE   F   +  L   +V+KP  G   D A VEE + K  K+LDVYE RL+ ++YL  D FTL DL H+P +  ++  T +  L  +R +++ W  +I++RPAW K++ L
Sbjct:   60 GYLKLFESRAIARYYATKYADQGTDLLGKTLEGRAIVDQ--WVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CF831916 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 2.047e-22
Identity = 64/155 (41.29%), Postives = 92/155 (59.35%), Query Frame = -2
Query:  342 GDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPM-FGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 797
            GD  L+ESRAI +Y+ ++      +L   G  K  A + VW EVE+ Q+ P  + + ++ + +PM FG   D   VEEN  KL K+L+VYEARL++ KYLA D  ++ DL H+     L  TP   + DA PHV AW  D+ +RP+  KV +L+K
Sbjct:   61 GDLFLWESRAICKYVCRK---NKPELLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMK 212          
BLAST of CF831916 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.269e-20
Identity = 61/150 (40.67%), Postives = 84/150 (56.00%), Query Frame = -2
Query:  357 GDQKLFESRAITQYIAQEFPDK---GTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 797
            GD  LFESRAI +++ ++   +   G +L    +  A + VW EVEA Q  PP+  +  E V+ P  G   + A V+EN  KL K+L+VYEARL+   YLA D  +L DL     ++ L+ T    L  A PHVSAW   + +RPA  KV
Sbjct:   63 GDLTLFESRAIARHVLRKHKPELLGGGRL----EQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAALVHALPHVSAWWQGLAARPAANKV 208          
BLAST of CF831916 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.164e-19
Identity = 60/155 (38.71%), Postives = 83/155 (53.55%), Query Frame = -2
Query:  357 GDQKLFESRAITQYIAQEFPDK-GTQLTCPGKPIAPLL---VWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 797
            GD  LFESRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS T  DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:   61 GDLVLFESRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYPKVKAWWEMLMARPAVQRV 215          
BLAST of CF831916 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.193e-16
Identity = 55/155 (35.48%), Postives = 81/155 (52.26%), Query Frame = -2
Query:  357 GDQKLFESRAITQYIAQEFPDK-GTQLTCPGKPIAPLL---VWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 797
            G+    +SRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS +  DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:   61 GESLHIKSRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAKVFDEYPKVKAWWEMLMARPAVQRV 215          
BLAST of CF831916 vs. ExPASy Swiss-Prot
Match: GSTF5_ARATH (Glutathione S-transferase PM239X14 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.212e-15
Identity = 50/135 (37.04%), Postives = 74/135 (54.81%), Query Frame = -2
Query:  390 KLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWK--EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAA 788
            K++ESRAI++Y+  ++    + L  P  P A  L  +   VE   FDPP+S L +E V+  M G+ T+    ++    L   +D YE  LS+ KYLA + FTL DL HLP    ++      + D++PHV AW A
Sbjct:   66 KIYESRAISRYLVAKYGKGSSLLPSPSDPKAYGLFEQAASVEYSSFDPPASSLAYERVFAGMRGLKTNEELAKKYVDTLNAKMDGYERILSKQKYLAGNDFTLADLFHLP-YGAMVAQLEPTVLDSKPHVKAWWA 199          
The following BLAST results are available for this feature:
BLAST of CF831916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF3_ARATH3.986e-2644.81Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF1_ORYSJ1.675e-2441.56Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF1_MAIZE4.873e-2442.86Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF7_ARATH7.037e-2340.91Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF2_ORYSJ2.047e-2241.29Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF4_MAIZE4.269e-2040.67Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_WHEAT6.164e-1938.71Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_WHEAT2.193e-1635.48Glutathione S-transferase 2 OS=Triticum aestivum G... [more]
GSTF5_ARATH9.212e-1537.04Glutathione S-transferase PM239X14 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01A04_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831916 ID=CF831916; Name=CF831916; organism=Citrus sinensis; type=EST; length=801bp
TTTTTTTTTTTTTTGATAAACCCATTGGGACAGTCGTTCATTGACCCTTA
TAATTTTACACACAGGGCCATACGCAGAATATCTCCAGCTTCGTTTTATT
AGGGTACATAGATAAAATAAAAACCTCAAGCCATCAACATCAAAGTTGAA
TATGAGGCAGTGCTGTTGAAATACAAAAGCGGTAGTACAAACTACAAAGC
ATCAATATTCTGCAGAATATTGATGACAAACGCCAAACAAGAGAATACGA
ACTCGAAAACCAGCCTAATAGGTATTACAAAAGATAAGTGACCACCGAGG
AGCGACTAACGTCTAGTAGGTAGCGGGCAGAGTGTTCAGTGTTTGAGCAA
GGCAAGGACCTTAGCCCAAGCCGGTCTGGAAGTGATATCAGCTGCCCATG
CGCTAACATGGGGGCGTGCATCAAACAGCTTCTTGACAGGCGTCCCCAAC
AACAAATTAATATTGGGGAGATGATGCAAATCGACCAAGGTGAAGCTGTC
GCACGCCAAGTATTTGGACTGAGACAAACGGGCCTCGTAAACATCTAAAA
TTTTGGCAAGCTTAGCTTCATTTTCTTCAACCGCAGCTGGATCAGTGGTC
ATTCCAAACATTGGCTTGTACACGAGCTCCCAGTTGAGCTTCGATGATGG
GGGGTCGAACTGGAGTGCCTCCACCTCCTTCCATACCAATAACGGGGCGA
TGGGCTTGCCTGGGCATGTTAACTGGGTGCCTTTGTCTGGAAACTCCTGG
GCGATGTATTGGGTGATTGCCCTTGATTCGAAGAGCTTCTGGTCGCCGTG
T
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