CF831924

Overview
NameCF831924
Unique NameCF831924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1911 contig Csv1_Contig1911:521..1364. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.101e-32
Identity = 81/189 (42.86%), Postives = 101/189 (53.44%), Query Frame = -2
Query:  238 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIV---MELRNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 792
            W V  GRRD   +    A+  LPSPF   ++LKK F D GL    DLV LSGGHT G + C F + RLYNF G    DP+L+P Y A L+  C    + T     D  +   FD+ +Y      KGL QSD  L +  GA  I    +   N   FF  FA +M RMG +  LTGTQGEIR+ C V+N+
Sbjct:  117 WAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLYNFNGTNRPDPTLNPSYLADLRRLCPRNGNGTVLVNFDVMTPNTFDNQFYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTLSFFGAFADAMIRMGNLRPLTGTQGEIRQNCRVVNS 305          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.101e-32
Identity = 76/187 (40.64%), Postives = 107/187 (57.22%), Query Frame = -2
Query:  241 EVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGN-GDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELR---NQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 789
            +VL GRRDG  +I A+A   LP    +   L   F+   L   DLV LSG HT G   C   +NRL+NF+GN G  DPS++P +   L+ +C    D T  A LDP S   FD+ Y+     N+G+ +SD  L ++ GA  + +  R   NQ++FF  FA+SM +MG + +LTG +GEIR+ C  +N
Sbjct:  143 DVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQGGDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGNVRILTGREGEIRRDCRRVN 329          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.051e-32
Identity = 84/204 (41.18%), Postives = 114/204 (55.88%), Query Frame = -2
Query:  238 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLT-NKGARNIV-MELRNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 843
            ALA RDS          WEV  GRRD   +  + ++  +P+P   F  +   F  +GL + DLV LSG HTIG S CT F  RLYN +GNG  D +L   YA  L+ +C       T   LD  +  KFD+HY+   I  KGL  SD  L T NK ++ +V +   NQ+ FF +FA+SM +MG ++ LTG +GEIR+ C  +N+
Sbjct:  133 ALAARDSTVITGGPS--WEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFLDFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRICRRVNH 334          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32
Identity = 80/207 (38.65%), Postives = 112/207 (54.11%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQ------DKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            ALA RDSV         W V TGR+DG +S+A EA  L PSP  + +  K+ F DKGL   DLV L G HTIG + C FF  RLYNFT  G+ DP++ P +   LKT C    D +    LD GS  KFD  ++    +   + +SD  L ++     +V +  ++       +F  EF ++M +M +++V T   GE+RK CS +N
Sbjct:  125 ALAARDSVDLS--DGPSWRVPTGRKDGRISLATEASNL-PSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKTLCPPNGDGSKRVALDIGSPSKFDESFFKNLRDGNAILESDQRLWSDAETNAVVKKYASRLRGLLGFRFDYEFGKAMIKMSSIDVKTDVDGEVRKVCSKVN 328          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 9.024e-32
Identity = 79/199 (39.70%), Postives = 111/199 (55.78%), Query Frame = -2
Query:  211 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELR----NQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLLHSSI 792
            W V  GRRD   +  A A+  LP+PF    +LK +F + GL    DLV LSGGHT G + C F  +RLYNF+  G  DP+L+  Y   L+ +C    + T   + D  +   FD+ YY    E KGL Q+D  L ++  A + +  +R       KFF  F ++M RMG +  LTGTQG+IR+ C V+N+ +SLLH  +
Sbjct:  146 WRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQTVLVDFDLRTPTVFDNKYYVNLKELKGLIQTDQELFSSPNATDTIPLVREYADGTQKFFNAFVEAMNRMGNITPLTGTQGQIRQNCRVVNS-NSLLHDVV 343          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.179e-31
Identity = 77/195 (39.49%), Postives = 108/195 (55.38%), Query Frame = -2
Query:  223 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELR----NQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLL 792
            W V  GRRD        A+  LP+PF   ++LK  F + GL    DLV LSGGHT G + C F  +RLYNF+  G  DP+LD  Y + L+ +C    + +   + D  +   FD+ YY    ENKGL QSD  L ++  A + +  +R     Q KFF  FA++M RM +++ LTG QGEIR  C V+N+   ++
Sbjct:  139 WRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFFDAFAKAMIRMSSLSPLTGKQGEIRLNCRVVNSKSKIM 333          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31
Identity = 80/204 (39.22%), Postives = 108/204 (52.94%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVME---LRNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            ALA+  SVS        W VL GRRD   +  A A+  +PSP  + S +   F+  GL   DLV LSG HT G + C  F+NRL+NF+G G+ DP+L+    + L+  C      +T   LD  +   FD++Y+     N GL QSD  L +  G+  I +      NQ  FF  FAQSM  MG ++ LTG+ GEIR  C  +N
Sbjct:  132 ALASEASVSLAGGPS--WTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVN 333          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.849e-31
Identity = 77/187 (41.18%), Postives = 103/187 (55.08%), Query Frame = -2
Query:  241 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLT-NKGARNIVMELRNQDK--FFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 792
            WE+  GRRD   +    A+  +P+P +    L   F  KGL  +DLV LSGGHTIGV+ CT F  RLYN  GN   D +L+  Y   L++ C         + LD  S  +FD+ Y+ + +  KGL  SD  LLT N G    +++   +D+  FF +FA+SM  MG +  LTG  GEIRK C VIN
Sbjct:  160 WELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNNISPLDLASPARFDNTYFKLLLWGKGLLTSDEVLLTGNVGKTGALVKAYAEDERLFFQQFAKSMVNMGNIQPLTGFNGEIRKSCHVIN 346          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.977e-31
Identity = 79/204 (38.73%), Postives = 106/204 (51.96%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVME---LRNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            ALA+  SVS        W VL GRRD   +  A A+  +PSPF   S +   F+  GL   DLV LSG HT G + C  F+NRL+NF+G    DP+L+    + L+  C      +T   LD  +   FD++Y+     N GL QSD  L +  G+  I +      NQ  FF  FAQSM  MG ++ LTG+ GEIR  C  ++
Sbjct:  102 ALASEASVSLTGGPS--WTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVD 303          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.977e-31
Identity = 79/199 (39.70%), Postives = 108/199 (54.27%), Query Frame = -2
Query:  211 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRN----QDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLLHSSI 792
            W V  GRRD   +    A+  LP+PF    +LK  F   GL    DLV LSGGHT G + C F  +RLYNF+  G  DP+L+  Y   L+ +C    + +   + D  +   FD+ YY    E KGL QSD  L ++  A + +  +R+      KFF  F ++M RMG +  LTGTQGEIR  C V+N+ +SLLH  +
Sbjct:  145 WRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSFADGTQKFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNS-NSLLHDIV 342          
The following BLAST results are available for this feature:
BLAST of CF831924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PERE5_ARMRU3.101e-3242.86Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER58_ARATH3.101e-3240.64Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER72_ARATH4.051e-3241.18Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER25_ARATH6.909e-3238.65Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER32_ARATH9.024e-3239.70Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER37_ARATH1.179e-3139.49Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER53_ARATH3.429e-3139.22Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER9_ARATH5.849e-3141.18Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PERA2_ARMRU9.977e-3138.73Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER1B_ARMRU9.977e-3139.70Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01A09_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831924 ID=CF831924; Name=CF831924; organism=Citrus sinensis; type=EST; length=844bp
TTTTTTTTTTTTTTTTTAACCCAGTCAAATTAATTCCCTTAAAAAGGGAG
CTGGTAGTTATAAACGTACAGCCTATCAATGATACAAATTAAGGCTTCAG
CTGCACAAACACACCCACATCCTTAATTTATTCCGGGGTACAATTATCAA
CAGATCTTAACAAACCCACAAGCCCAGCAGCAGACTAAATTGGCAATTAC
ATTGACATCAGATAGATGAATGCAACAAACTATCTGGATTATTAATAACA
CTGCACTTCTTTCGAATCTCCCCTTGAGTGCCAGTGAGAACATTCATAGC
TCCCATTCTCTTCATTGACTGAGCAAACTCGGGGAAAAACTTATCTTGGT
TTCTCAACTCCATGACAATGTTTCTTGCTCCCTTATTGGTTAAAAGAGCA
GCATCAGATTGGAATAGACCCTTGTTCTCGATAAAAATATCATAGTAATG
GCTGTCGAATTTTCGAAAACTCCCCGGGTCCAATTCGGCAGTAGTCGTTG
TGTCGGCAAGGCTCTTGCATTTGGTTTTTAAGAATGCAGCGTATCGTGGG
TCCAATGAAGGATCTTGATCTCCATTTCCTGTGAAATTGTAAAGCCTGTT
GCTGAAAAAGGTGCAGTGCGAAACTCCGATTGTGTGGCCACCTGAAAGGA
CTACAAGATCTTTGACAGTGAGACCTTTGTCGTTAAAATTTTTCTTGAGT
TCACTGAAGTTGGCAAAAGGTGAAGGAAGCAGCAGATCGGCCTCAGCAGC
TATGGACACACTGCCATCTCTTCTACCGGTGAGCACTTCCCACAGGTCCG
GTTTTTGAAATTGGAATGAAACAGAATCCCTTGTAGCCAATGCT
back to top