CF831924

Overview
NameCF831924
Unique NameCF831924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1911 contig Csv1_Contig1911:521..1364. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.882e-29
Identity = 83/205 (40.49%), Postives = 108/205 (52.68%), Query Frame = -2
Query:  241 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL-----RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 840
            LA RDSV         W V  GR+DG V+  + A+ L PSPF     +   F   GL V D+V LSG HT G + C  FSNRL+NFTG G  D +L+    + L+T C    +   TA LD  S   FD++Y+   +E KGL  SD  L ++  A N    L     R+Q  FF +F  SM RMG++  + G  GE+R  C VIN
Sbjct:  128 LAARDSV--YLSGGPQWRVALGRKDGLVANQSSANNL-PSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPLDRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFTCSMIRMGSL--VNGASGEVRTNCRVIN 327          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.457e-29
Identity = 77/207 (37.20%), Postives = 109/207 (52.66%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFFP------EFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            ALA RD V         W V  GR DG +S+A+  +++LP P  + +  K  F +K L  +DLVVL+ GHTIG + C  F +R +N+   G  DP++ P +   ++ +C    D  T   LD GS  +FD+ Y +     +GL +SD  L TN   R IV  L      FP      EFA+SM +M  + + TG  GEIR+ CS +N
Sbjct:  130 ALAARDFV--HLAGGPWWPVPLGRLDGRISLAS--NVILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCPLNGDPATRVVLDTGSGDQFDTSYLNNLKNGRGLLESDQVLWTNLETRPIVERLLGLR--FPFLIFGLEFARSMTKMSQIEIKTGLDGEIRRVCSAVN 330          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.457e-29
Identity = 79/202 (39.11%), Postives = 112/202 (55.45%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGAR-NIVMELRNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            ALA RD V      P+ ++V  GRRDG VS A+     LP P  +   L + F   GL++ D++ LSG HTIG SHC  F+NRL+NF+     DP++DP YA  L   C S  +     ++D  S   FD+ YY   +  KGLF SD AL  +  ++  +V    N ++F+  F+ +M+ +G + V  G QGEIR+ CS  N
Sbjct:  132 ALAARDVVVL-VGGPE-FKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQAC-SDPNPDAVVDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFNDLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVKVGNQGEIRRDCSAFN 330          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.457e-29
Identity = 73/201 (36.32%), Postives = 105/201 (52.24%), Query Frame = -2
Query:  241 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFFPE-FAQSMKRMGAMNVLTGTQGEIRKKCSVIN 840
            +ATRD V+        + V  GRRDG  S A+     LP P  + ++L   F + GL+  D++ LSG HT+G +HCT   NRLYNF    + DP+++  Y   LK  C    D      +DP + R+FD+ YY    + KGLF SD  L T+  ++  V    N  + F + F  SM ++G + V TG+ G IR+ C   N
Sbjct:  131 MATRDVVNLAGGPQ--YAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCPQNIDPRVAINMDPNTPRQFDNVYYKNLQQGKGLFTSDQVLFTDSRSKPTVDLWANNGQLFNQAFISSMIKLGRVGVKTGSNGNIRRDCGAFN 329          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.457e-29
Identity = 76/199 (38.19%), Postives = 106/199 (53.27%), Query Frame = -2
Query:  211 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELR----NQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLLHSSI 792
            W V  GRRD   +    A+  LP+PF    +LK +F + GL    DLV LSGGHT G + C F  +RLYNF+  G  DP+L+  Y   L+  C    + +   + D  +   FD+ YY    E KGL QSD  L ++  A + +  +R        FF  F ++M RMG +   TGTQG+IR  C V+N+ +SLLH  +
Sbjct:  147 WRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNRSALVDFDLRTPTVFDNKYYVNLKERKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNS-NSLLHDVV 344          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.209e-29
Identity = 73/198 (36.87%), Postives = 111/198 (56.06%), Query Frame = -2
Query:  253 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFFPE-FAQSMKRMGAMNVLTGTQGEIRKKC 843
            +LA RD+V+        W V  GR+DG +S A E   L P+P  N S+L++NF  +GL++ DLV LSGGHT+G +HC+ F NRL+ F    + DP+L+P +AA L+  C +            G+   FD+ YY + I+ K LF SD +LL     + +V +  N ++ F   F +SM +M +   ++G   E+R  C
Sbjct:  122 SLAARDAVALS--GGPTWAVPKGRKDGRISKAIETRQL-PAPTFNISQLRQNFGQRGLSMHDLVALSGGHTLGFAHCSSFQNRLHKFNTQKEVDPTLNPSFAARLEGVCPAHNTVKNAGSNMDGTVTSFDNIYYKMLIQGKSLFSSDESLLAVPSTKKLVAKYANSNEEFERAFVKSMIKMSS---ISGNGNEVRLNC 313          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 3.209e-29
Identity = 81/206 (39.32%), Postives = 109/206 (52.91%), Query Frame = -2
Query:  238 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL-----RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 840
            LA RDSV         W V  GR+DG V+    A+ L PSPF     +   F    L + D+V LSG HT G + C  FSNRL+NFTG G+ D +L+    + L+T C    ++  TA LD  +   FD++Y+   +E KGL  SD  L ++  A N   +L     R+Q  FF +F  +M RMG  N+  G  GE+R  C VINN
Sbjct:  128 LAARDSVVLSGGPG--WRVALGRKDGLVANQNSANNL-PSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMG--NISNGASGEVRTNCRVINN 328          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.192e-29
Identity = 81/209 (38.76%), Postives = 109/209 (52.15%), Query Frame = -2
Query:  238 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLL-----LPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTN--KGARNIVMELRNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 843
            AL  RDS+         WEV  GRRD     A EA L+     +PSP +    +   FN +GL + DLV L G HTIG S C  F  RLYN TGN D D +L+  YA+ L+  C    +      LD  +  KFD++YY   +  +GL  SD  L T   +    +     N+  FF +FA+SM +MG ++ LTGT GEIR+ C  +N+
Sbjct:  141 ALVARDSIVICGGPS--WEVYLGRRD-----AREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNLDYVTPTKFDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRRICRRVNH 342          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.150e-29
Identity = 75/195 (38.46%), Postives = 103/195 (52.82%), Query Frame = -2
Query:  223 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELR----NQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLL 792
            W V  GRRD        A+  LP P +   +LK  F + GL    DLV LSGGHT G S C F  +RLYNF   G  DP+LD  Y A L+ +C    + +   + D  +   FD+ YY    ENKGL QSD  L ++  A + +  +R     Q  FF  F +++ RM +++ LTG QGEIR  C V+N+   ++
Sbjct:  139 WMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDAADTLPLVRAYADGQGTFFDAFVKAIIRMSSLSPLTGKQGEIRLNCRVVNSKSKIM 333          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.220e-28
Identity = 78/209 (37.32%), Postives = 106/209 (50.72%), Query Frame = -2
Query:  232 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKC-----KSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQ-DKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPD 840
            LATRD+V         + V TGRRDG    A   DL  PSP  +  E    F  KGL V D+  L G H++G +HC++  +RLYNF   G  DP+++    + L+  C     K   D       D GS  +F S YY   + +  + + D  LL N  ++ I  E  +  + F   FA +M RMG++NVLTGT GEIR+ C V N  D
Sbjct:  134 LATRDAV--HMAGAPSYPVFTGRRDGGTLNADAVDL--PSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRTQKGQTDPLVYLNPDSGSSNRFTSSYYSRVLSHNAVLRVDQELLNNDDSKEITQEFASGFEDFRKSFALAMSRMGSINVLTGTAGEIRRDCRVTNAND 338          
The following BLAST results are available for this feature:
BLAST of CF831924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PERN_ARMRU1.882e-2940.49Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER70_ARATH2.457e-2937.20Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER55_ARATH2.457e-2939.11Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER51_ARATH2.457e-2936.32Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER34_ARATH2.457e-2938.19Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER64_ARATH3.209e-2936.87Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER59_ARATH3.209e-2939.32Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER36_ARATH4.192e-2938.76Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER38_ARATH7.150e-2938.46Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER61_ARATH1.220e-2837.32Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01A09_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831924 ID=CF831924; Name=CF831924; organism=Citrus sinensis; type=EST; length=844bp
TTTTTTTTTTTTTTTTTAACCCAGTCAAATTAATTCCCTTAAAAAGGGAG
CTGGTAGTTATAAACGTACAGCCTATCAATGATACAAATTAAGGCTTCAG
CTGCACAAACACACCCACATCCTTAATTTATTCCGGGGTACAATTATCAA
CAGATCTTAACAAACCCACAAGCCCAGCAGCAGACTAAATTGGCAATTAC
ATTGACATCAGATAGATGAATGCAACAAACTATCTGGATTATTAATAACA
CTGCACTTCTTTCGAATCTCCCCTTGAGTGCCAGTGAGAACATTCATAGC
TCCCATTCTCTTCATTGACTGAGCAAACTCGGGGAAAAACTTATCTTGGT
TTCTCAACTCCATGACAATGTTTCTTGCTCCCTTATTGGTTAAAAGAGCA
GCATCAGATTGGAATAGACCCTTGTTCTCGATAAAAATATCATAGTAATG
GCTGTCGAATTTTCGAAAACTCCCCGGGTCCAATTCGGCAGTAGTCGTTG
TGTCGGCAAGGCTCTTGCATTTGGTTTTTAAGAATGCAGCGTATCGTGGG
TCCAATGAAGGATCTTGATCTCCATTTCCTGTGAAATTGTAAAGCCTGTT
GCTGAAAAAGGTGCAGTGCGAAACTCCGATTGTGTGGCCACCTGAAAGGA
CTACAAGATCTTTGACAGTGAGACCTTTGTCGTTAAAATTTTTCTTGAGT
TCACTGAAGTTGGCAAAAGGTGAAGGAAGCAGCAGATCGGCCTCAGCAGC
TATGGACACACTGCCATCTCTTCTACCGGTGAGCACTTCCCACAGGTCCG
GTTTTTGAAATTGGAATGAAACAGAATCCCTTGTAGCCAATGCT
back to top