CF831924

Overview
NameCF831924
Unique NameCF831924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1911 contig Csv1_Contig1911:521..1364. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.717e-28
Identity = 75/207 (36.23%), Postives = 109/207 (52.66%), Query Frame = -2
Query:  235 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPG--SFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFFPEFAQSMKRMGAMNVLTGTQ-GEIRKKC-SVINNP 843
            ALATRD V+        +E+ TGR DG +S A   DL  PSP    +E    F+ + L++ D+V+L GGHTIGV+HC+F  +RLYNF      DPS+DP+    L  KC   + T     LD    S    D  +Y     ++G+   D  L  +     +V ++ N + F   F Q+M  +G++ V++  + GEIR+ C S  NNP
Sbjct:  124 ALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVDL--PSPKMTVAETAAKFDQRKLSLNDMVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMDPKLVEELSAKCPKSSSTDGIISLDQNATSSNTMDVSFYKEIKVSRGVLHIDQKLAIDDLTSKMVTDIANGNDFLVRFGQAMVNLGSVRVISKPKDGEIRRSCRSTCNNP 328          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.717e-28
Identity = 75/202 (37.13%), Postives = 107/202 (52.97%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFFPE-FAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            ALATRD V      P+ + V  GRRDG +S  A     LP P     +L   F   GL+  D++ LSG HTIG +HC  FS R+YNF+     DP+L+ RYA  L+  C    D      +DP S   FD+ Y+    +  GLF SD  L +++ +R+ V    + +  F + F  ++ ++G + V TG  GEIR+ CS +N
Sbjct:  124 ALATRDVVVLT-GGPN-YPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCPIRVDLRIAINMDPTSPNTFDNAYFKNLQKGMGLFTSDQVLFSDERSRSTVNSFASSEATFRQAFISAITKLGRVGVKTGNAGEIRRDCSRVN 323          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.548e-28
Identity = 81/204 (39.71%), Postives = 109/204 (53.43%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKC--KSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A+A RDSV      P  W VL GRRD + +  ++A+  LP+P ++ +EL  NF+ KGL V D+V LSG HTIG + C  F +RLYN T       ++D  +A  LK  C   + +  +  A LD  +   FDS YY   + NKGL  SD  L       N V     N   F   F  +M +MG ++ LTGTQG+IR  CS +N
Sbjct:  120 AVAARDSV-VALGGPS-WTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNET-------NIDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTAAMVKMGNISPLTGTQGQIRLNCSKVN 314          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.548e-28
Identity = 77/202 (38.12%), Postives = 103/202 (50.99%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFF-PEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A+A RDSV         W VL GRRD + +  + A+  LP+PF N S L   F++KG T K+LV LSG HTIG + CT F  R+YN       + ++DP YA  L+  C S+   T  +  D  +  KFD+ YY      KGL  SD  L       + V    N    F  +F  +M +MG ++ LTGT G+IR  C   N
Sbjct:  124 AVAARDSVVALGGAS--WNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYN-------ESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 316          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 4.634e-28
Identity = 81/204 (39.71%), Postives = 109/204 (53.43%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKC--KSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A+A RDSV      P  W VL GRRD + +  ++A+  LP+P ++ +EL  NF+ KGL V D+V LSG HTIG + C  F +RLYN T       ++D  +A  LK  C   + +  +  A LD  +   FDS YY   + NKGL  SD  L       N V     N   F   F  +M +MG ++ LTGTQG+IR  CS +N
Sbjct:  120 AVAARDSV-VALGGPS-WTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNET-------NIDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTVAMVKMGNISPLTGTQGQIRLNCSKVN 314          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28
Identity = 84/204 (41.18%), Postives = 115/204 (56.37%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTA--ELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A+A RD V+        W VL GR+DG++S A E   L P P  N S+L ++F  +GL+VKD+V LSGGHTIG SHC+ F +RL NF+   D DPS++  +A  LK KC   ++    A   LD  S   FD+ YY   +  KG+F SD ALL +   + IV    ++Q  FF EFA SM ++G   V     G++R     +N
Sbjct:  125 AIAARDVVTLS--GGPYWSVLKGRKDGTISRANETRNL-PPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTVLDSTS-SVFDNVYYKQILSGKGVFGSDQALLGDSRTKWIVETFAQDQKAFFREFAASMVKLGNFGV--KETGQVRVNTRFVN 322          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28
Identity = 77/201 (38.31%), Postives = 110/201 (54.73%), Query Frame = -2
Query:  241 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIV-MELRNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 840
            +A RD+V+     PD WEV  GR+D   +   ++D ++PSP AN + L   F    L+VKD+V LSG H+IG   C     RLYN +G+G  DP+L+P Y   L   C    D   T +LD  + + FD+ Y+   +  +G   SD  L TN   R  V M   +QD+FF  FA+ M ++G  ++ +G  GEIR  C V+N
Sbjct:  124 MAARDAVALT-GGPD-WEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLGGDENVTGDLD-ATPQVFDNQYFKDLVSGRGFLNSDQTLYTNLVTREYVKMFSEDQDEFFRAFAEGMVKLG--DLQSGRPGEIRFNCRVVN 319          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27
Identity = 69/204 (33.82%), Postives = 107/204 (52.45%), Query Frame = -2
Query:  241 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADT-TTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELR---NQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 840
            LA    +     K   W+VL GR+D   +  + A+  +PSPF   + +   F +KG+ + DLV LSG HT G + C  F  RL+NF G+G+ D ++D  +   L+  C    +   T   LD  +   FD+ Y+     N+GL Q+D  L +  G+  I +  R   +Q +FF +F  SM ++G ++ LTGT G+IR  C  +N
Sbjct:  121 LALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICPQGGNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFFDDFVSSMIKLGNISPLTGTNGQIRTDCKRVN 324          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27
Identity = 78/204 (38.24%), Postives = 107/204 (52.45%), Query Frame = -2
Query:  241 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL----RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 840
            LA RD+V     +   WEV  GR DG +S A+  D+ LP P  + ++ K++F  K L   DLV L GGHTIG + C     R  NF G G  DPS+DP +   +  +C    +  T  ELD GS  KFD+ +      ++ + QSD  L  +   R I+  L    R   +F  EF +SM +M  + V TG+ GEIR+ CS IN
Sbjct:  134 LAARDAVVLTGGQR--WEVPLGRLDGRISQAS--DVNLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCPQ--NGGTRVELDEGSVDKFDTSFLRKVTSSRVVLQSDLVLWKDPETRAIIERLLGLRRPSLRFGTEFGKSMVKMSLIEVKTGSDGEIRRVCSAIN 331          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.300e-27
Identity = 71/201 (35.32%), Postives = 104/201 (51.74%), Query Frame = -2
Query:  241 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFFPE-FAQSMKRMGAMNVLTGTQGEIRKKCSVIN 840
            +ATRD V+        ++V  GR DG  S AA     LP P  + ++L   F   GL++ D++ LSG HT+G +HCT   NR+Y F      DP+++  Y   LK  C    D      +DP + R+FD+ YY    + KGLF SD  L T++ ++  V    N  + F + F  SM ++G + V TG+ G IR+ C   N
Sbjct:  131 MATRDVVNLAGGPQ--YDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNIDPRVAINMDPTTPRQFDNVYYKNLQQGKGLFTSDQVLFTDRRSKPTVDLWANNGQLFNQAFINSMIKLGRVGVKTGSNGNIRRDCGAFN 329          
The following BLAST results are available for this feature:
BLAST of CF831924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER60_ARATH2.717e-2836.23Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER16_ARATH2.717e-2837.13Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER2_ORYSJ3.548e-2839.71Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER1_ARAHY3.548e-2838.12Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER2_ORYSI4.634e-2839.71Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER66_ARATH6.053e-2841.18Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER17_ARATH6.053e-2838.31Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PERX_TOBAC1.032e-2733.82Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER69_ARATH1.761e-2738.24Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER50_ARATH2.300e-2735.32Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01A09_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831924 ID=CF831924; Name=CF831924; organism=Citrus sinensis; type=EST; length=844bp
TTTTTTTTTTTTTTTTTAACCCAGTCAAATTAATTCCCTTAAAAAGGGAG
CTGGTAGTTATAAACGTACAGCCTATCAATGATACAAATTAAGGCTTCAG
CTGCACAAACACACCCACATCCTTAATTTATTCCGGGGTACAATTATCAA
CAGATCTTAACAAACCCACAAGCCCAGCAGCAGACTAAATTGGCAATTAC
ATTGACATCAGATAGATGAATGCAACAAACTATCTGGATTATTAATAACA
CTGCACTTCTTTCGAATCTCCCCTTGAGTGCCAGTGAGAACATTCATAGC
TCCCATTCTCTTCATTGACTGAGCAAACTCGGGGAAAAACTTATCTTGGT
TTCTCAACTCCATGACAATGTTTCTTGCTCCCTTATTGGTTAAAAGAGCA
GCATCAGATTGGAATAGACCCTTGTTCTCGATAAAAATATCATAGTAATG
GCTGTCGAATTTTCGAAAACTCCCCGGGTCCAATTCGGCAGTAGTCGTTG
TGTCGGCAAGGCTCTTGCATTTGGTTTTTAAGAATGCAGCGTATCGTGGG
TCCAATGAAGGATCTTGATCTCCATTTCCTGTGAAATTGTAAAGCCTGTT
GCTGAAAAAGGTGCAGTGCGAAACTCCGATTGTGTGGCCACCTGAAAGGA
CTACAAGATCTTTGACAGTGAGACCTTTGTCGTTAAAATTTTTCTTGAGT
TCACTGAAGTTGGCAAAAGGTGAAGGAAGCAGCAGATCGGCCTCAGCAGC
TATGGACACACTGCCATCTCTTCTACCGGTGAGCACTTCCCACAGGTCCG
GTTTTTGAAATTGGAATGAAACAGAATCCCTTGTAGCCAATGCT
back to top