CF831924

Overview
NameCF831924
Unique NameCF831924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1911 contig Csv1_Contig1911:521..1364. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.812e-25
Identity = 74/204 (36.27%), Postives = 104/204 (50.98%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADT--TTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDK-FFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A+A RDSV      PD W+V  GRRD   +  + A+  +P P ++ S L   F  +GL+ +D+V LSG HTIG + CT F  R+YN T       ++D  +A   +  C S + +     A LD  +   FD++YY   I  KGL  SD  L       + V    N  K F  +F   M +MG +  LTG++GEIRK C  +N
Sbjct:  127 AIAARDSVVI-LGGPD-WDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNET-------NIDSSFAKTRQASCPSASGSGDNNLAPLDLQTPTTFDNYYYKNLINQKGLLHSDQVLYNGGSTDSTVKTYVNNPKTFTSDFVAGMIKMGDITPLTGSEGEIRKSCGKVN 321          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.812e-25
Identity = 67/186 (36.02%), Postives = 102/186 (54.84%), Query Frame = -2
Query:  241 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSL-ADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIV-MELRNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 792
            ++V  GRRD   S ++    LLP P    S++ + F  KG TV+++V LSG H+IG SHC  F  R+      G  +   +PR+A  LK  C +   D T +   D  +  KFD+ YY    +  GL +SD  L ++   R  V +  +NQD FF +FA++M+++    + TG +GEIR++C  IN
Sbjct:  137 YDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEFVGRV------GRNNTGYNPRFAVALKKACANYPKDPTISVFNDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDAIN 316          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.672e-25
Identity = 67/185 (36.22%), Postives = 99/185 (53.51%), Query Frame = -2
Query:  241 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDK-FFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 792
            W V  GRRD + +    A+  LP PF   + L  +F  KGL+ +D+V LSG HTIG + C  F +R+Y+   NG     +D  +A+  + +C    +    A LD  +  +FD++Y+   I+ KGL QSD  L       NIV E  N  + F  +FA +M +MG ++ L+G  G IRK C  +N
Sbjct:  144 WTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIYS---NG---TDIDAGFASTRRRQCPQEGENGNLAPLDLVTPNQFDNNYFKNLIQKKGLLQSDQVLFNGGSTDNIVSEYSNSARAFSSDFAAAMIKMGDISPLSGQNGIIRKVCGSVN 322          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.672e-25
Identity = 76/207 (36.71%), Postives = 105/207 (50.72%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIV-MELRNQDKFF-----PEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            ALA RD++S        +EV TGRRDG VS  + A  + P    +   LK  F  KGL  KDLV+LS  HTIG + C F S RLY+F   G  DP+++P +   L T+C    D      +D  S R FD        +   + Q+DA L  +   R +V   L   + FF      +F +++ +MG + V TG +GEIR+ CS  N
Sbjct:  123 ALAARDAISLA--NGPAYEVPTGRRDGRVSNMSLAKDM-PEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQNGDINVRLPIDRFSERLFDKQILQNIKDGFAVLQTDAGLYEDVTTRQVVDSYLGMLNPFFGPTFESDFVKAIVKMGKIGVKTGFKGEIRRVCSAFN 326          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.672e-25
Identity = 75/203 (36.95%), Postives = 106/203 (52.22%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSL-ADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIV-MELRNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A ATRD V+        +EV  GR+DG  S A +    LP    +  ++   F   G T+K+LV LSGGHTIG SHC  FSNR++        DP L+ ++A  LK  CK+   + T  A LDP +  KFD+ Y+       GL  SD  L  +   R  V +   NQ  FF +FA++M+++G + V     GE+R++C   N
Sbjct:  127 AQATRDLVTMV--GGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIF-----PKVDPELNAKFAGVLKDLCKNFETNKTMAAFLDPVTPGKFDNMYFKNLKRGLGLLASDHILFKDPSTRPFVELYANNQTAFFEDFARAMEKLGRVGVKGEKDGEVRRRCDHFN 322          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.796e-25
Identity = 74/202 (36.63%), Postives = 101/202 (50.00%), Query Frame = -2
Query:  238 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 840
            +A RDSV      P  W V  GRRD + + A+ A+  LP P ++ S+L+  F  K L   D+V LSG HTIG + C+ F  R+Y        D +++  +A  LK  C      T  A LD  +   FD+ YY   +  KGL  SD  L  N+   N V     N   F   F  +M +MG +  LTGTQG+IR  CS +N+
Sbjct:  119 VAARDSV-VALGGPS-WTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNFRTRIYG------GDTNINTAFATSLKANCPQSGGNTNLANLDTMTPNAFDNAYYTNLLSQKGLLHSDQVLFNNETTDNTVRNFASNAAAFSSAFTTAMIKMGNIAPLTGTQGQIRLSCSKVNS 312          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PERX_LUPPO (Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.395e-24
Identity = 66/165 (40.00%), Postives = 91/165 (55.15%), Query Frame = -2
Query:  241 PSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCK-SLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL--RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 726
            P P ++ + L   F  KGLT  DL VLSGGHTIG S C FF  R+YN       D ++D  +A   +  C  S    T  A LD  +  +FD++YY   + N+GL  SD  L  N G+++ ++     N  KFF +FA ++ +M  ++ LTG  GEIRK C VIN
Sbjct:    2 PGPSSDLTTLTTKFAAKGLTPSDLTVLSGGHTIGQSECQFFKTRIYN-------DTNIDTNFATSRQANCPFSAGGETNLAPLDSLTPNRFDNNYYKDLVSNRGLLHSDQVLF-NGGSQDTLVRTYSTNNVKFFSDFAAAIVKMSKISPLTGIAGEIRKNCRVIN 158          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 3.109e-24
Identity = 73/204 (35.78%), Postives = 104/204 (50.98%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADT--TTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQ-DKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A+A RDSV  Q   P+ W V  GRRD   +  A A+  +P+P  + S+L  +F+  GL+ +D+V LSG HTIG S C  F  R+YN T       +++  +A   +  C   A +     A LD  S   FD+ Y+   +  +GL  SD  L       +IV    N    F  +FA +M +MG ++ LTG+ GEIRK C   N
Sbjct:  102 AIAARDSV-VQLGGPN-WNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNET-------NINAAFATLRQRSCPRAAGSGDANLAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFNGGSTDSIVRGYSNSPSSFNSDFAAAMIKMGDISPLTGSSGEIRKVCGKTN 296          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.925e-24
Identity = 73/204 (35.78%), Postives = 106/204 (51.96%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADL-LLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALL-TNKGARNIVMEL-RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A+A RD+   ++     W V  GRRD + +  A A+   LP       +L   F+ KGL  +DLV LSG HTIG S C  F +RLY      +    +D  +A+  K +C ++      A LD  +   FD++YY   ++ KGL  +D  L  +      IV E  +N+ KF  +FA +M +MG +  LTG+ GEIRK CS +N
Sbjct:  126 AVAARDAS--EYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTRDLVALSGAHTIGQSQCFLFRDRLY------ENSSDIDAGFASTRKRRCPTVGGDGNLAALDLVTPNSFDNNYYKNLMQKKGLLVTDQVLFGSGASTDGIVSEYSKNRSKFAADFATAMIKMGNIEPLTGSNGEIRKICSFVN 321          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.925e-24
Identity = 75/202 (37.13%), Postives = 103/202 (50.99%), Query Frame = -2
Query:  247 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCK-SLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFPEFAQSMKRMGAMNVLTGTQ-GEIRKKCSV 843
            A+A RD +         ++V  GR DG  S A      +P   +   +L K F  KGLTV++LVVLSG HTIG +HC  F  RLY++ G    DPSLD R    L+  C  S   +     LD  +   FD+ Y+     N GL  SD AL  +   + I +E+ R++ KF   F  +M +MG++ V  G + GEIR  C V
Sbjct:  145 AIAARDFI--HLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVVLPLDATTPFVFDNGYFTGLGTNMGLLGSDQALFLDPRTKPIALEMARDKQKFLKAFGDAMDKMGSIGVKRGKRHGEIRTDCRV 344          
The following BLAST results are available for this feature:
BLAST of CF831924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER4_VITVI2.812e-2536.27Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER31_ARATH2.812e-2536.02Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PERX_NICSY3.672e-2536.22Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER43_ARATH3.672e-2536.71Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER41_ARATH3.672e-2536.95Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER1_WHEAT4.796e-2536.63Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PERX_LUPPO1.395e-2440.00Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 ... [more]
PERP7_BRARA3.109e-2435.78Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER5_ARATH6.925e-2435.78Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER19_ARATH6.925e-2437.13Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01A09_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831924 ID=CF831924; Name=CF831924; organism=Citrus sinensis; type=EST; length=844bp
TTTTTTTTTTTTTTTTTAACCCAGTCAAATTAATTCCCTTAAAAAGGGAG
CTGGTAGTTATAAACGTACAGCCTATCAATGATACAAATTAAGGCTTCAG
CTGCACAAACACACCCACATCCTTAATTTATTCCGGGGTACAATTATCAA
CAGATCTTAACAAACCCACAAGCCCAGCAGCAGACTAAATTGGCAATTAC
ATTGACATCAGATAGATGAATGCAACAAACTATCTGGATTATTAATAACA
CTGCACTTCTTTCGAATCTCCCCTTGAGTGCCAGTGAGAACATTCATAGC
TCCCATTCTCTTCATTGACTGAGCAAACTCGGGGAAAAACTTATCTTGGT
TTCTCAACTCCATGACAATGTTTCTTGCTCCCTTATTGGTTAAAAGAGCA
GCATCAGATTGGAATAGACCCTTGTTCTCGATAAAAATATCATAGTAATG
GCTGTCGAATTTTCGAAAACTCCCCGGGTCCAATTCGGCAGTAGTCGTTG
TGTCGGCAAGGCTCTTGCATTTGGTTTTTAAGAATGCAGCGTATCGTGGG
TCCAATGAAGGATCTTGATCTCCATTTCCTGTGAAATTGTAAAGCCTGTT
GCTGAAAAAGGTGCAGTGCGAAACTCCGATTGTGTGGCCACCTGAAAGGA
CTACAAGATCTTTGACAGTGAGACCTTTGTCGTTAAAATTTTTCTTGAGT
TCACTGAAGTTGGCAAAAGGTGAAGGAAGCAGCAGATCGGCCTCAGCAGC
TATGGACACACTGCCATCTCTTCTACCGGTGAGCACTTCCCACAGGTCCG
GTTTTTGAAATTGGAATGAAACAGAATCCCTTGTAGCCAATGCT
back to top