CF831927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_SYNJB (ATP synthase gamma chain OS=Synechococcus sp. GN=atpG PE=3 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 1.258e-12 Identity = 25/41 (60.98%), Postives = 36/41 (87.80%), Query Frame = 3 Query: 96 LFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 +F+Q P QILDA++PLY+N Q+LRAL+E+ A+E A+RM+AM Sbjct: 234 IFEQDPVQILDALLPLYLNNQLLRALQEAAASELAARMTAM 274 HSP 2 Score: 38.5058 bits (88), Expect = 1.258e-12 Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA*AL 340 + L LAYN+ RQA IT E+LE+VAGA AL Sbjct: 286 RTLGLAYNKARQAAITQEILEVVAGAEAL 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP8 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 8801) GN=atpG PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 1.634e-12 Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 3 Query: 24 TIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 T +GK+ VER +F+Q P QILDA++PLY+N Q+LR L+E+ A+E A+RM+AM Sbjct: 210 TRDGKLRVERETIAQEVSSFPQDMIFEQDPIQILDALLPLYINNQLLRGLQEAAASELAARMTAM 274 HSP 2 Score: 35.8094 bits (81), Expect = 1.634e-12 Identity = 17/27 (62.96%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 260 LSLAYNQERQAKITGELLEIVAGA*AL 340 L+L+YN+ RQA IT +L+E+VAGA AL Sbjct: 288 LTLSYNKARQAAITQQLMEVVAGANAL 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_THEEB (ATP synthase gamma chain OS=Thermosynechococcus elongatus (strain BP-1) GN=atpG PE=1 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 1.634e-12 Identity = 31/66 (46.97%), Postives = 43/66 (65.15%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT + V R T L +F+Q P QILDA++PLY+N Q+LRAL+E+ A+E A+RM+AM Sbjct: 209 TTRGSHLEVNREKVTSTLPALPSDMIFEQDPLQILDALLPLYLNNQLLRALQEAAASELAARMTAM 274 HSP 2 Score: 36.965 bits (84), Expect = 1.634e-12 Identity = 18/27 (66.67%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 260 LSLAYNQERQAKITGELLEIVAGA*AL 340 L+L+YN+ RQA IT E+LE+VAGA AL Sbjct: 288 LTLSYNKARQAAITQEILEVVAGAEAL 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_VIGUN (ATP synthase subunit gamma, chloroplastic (Fragment) OS=Vigna unguiculata PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12 Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT EGK+ VER + SP+ F+Q P QILDA++PLY+N QILRAL+ES A+E A+RMSAM Sbjct: 48 TTKEGKLTVERDVVRTKTTDYSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAM 113
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_PROM5 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9515) GN=atpG PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 2.755e-12 Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKL-FDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT K++VE+ N N+ + P + F+Q P Q+LD+++PLY+ QILRAL+ES A+E A RM+AM Sbjct: 211 TTKNSKLLVEKSNLEKNESDRLPSDIVFEQSPDQLLDSLLPLYLQNQILRALQESAASELACRMTAM 277 HSP 2 Score: 32.3426 bits (72), Expect = 2.755e-12 Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 2 Query: 260 LSLAYNQERQAKITGELLEIVAGA 331 L+L YN+ RQA IT E+LE+V G+ Sbjct: 291 LNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_PROMT (ATP synthase gamma chain OS=Prochlorococcus marinus (strain NATL2A) GN=atpG PE=3 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 2.755e-12 Identity = 30/67 (44.78%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKL-FDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT + ++I+E+ N+ P + F+Q P Q+L+A++PLY+ Q+LRAL+ES A+E ASRM+AM Sbjct: 211 TTKDSQLIIEKDAAPSNEEPKLPSDIVFEQSPDQLLNALLPLYLQNQLLRALQESAASELASRMTAM 277 HSP 2 Score: 36.1946 bits (82), Expect = 2.755e-12 Identity = 16/26 (61.54%), Postives = 21/26 (80.77%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA 331 KNL++ YN+ RQA IT E+LE+V GA Sbjct: 289 KNLTIDYNKARQAAITQEILEVVGGA 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_PROM1 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain NATL1A) GN=atpG PE=3 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 2.755e-12 Identity = 30/67 (44.78%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKL-FDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT + ++I+E+ N+ P + F+Q P Q+L+A++PLY+ Q+LRAL+ES A+E ASRM+AM Sbjct: 211 TTKDSQLIIEKDAAPTNEEPKLPSDIVFEQSPDQLLNALLPLYLQNQLLRALQESAASELASRMTAM 277 HSP 2 Score: 36.1946 bits (82), Expect = 2.755e-12 Identity = 16/26 (61.54%), Postives = 21/26 (80.77%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA 331 KNL++ YN+ RQA IT E+LE+V GA Sbjct: 289 KNLTIDYNKARQAAITQEILEVVGGA 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_PROMP (ATP synthase gamma chain OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=atpG PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 4.646e-12 Identity = 32/67 (47.76%), Postives = 46/67 (68.66%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKL-FDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT K++VE+ N N + P + F+Q P Q+LD+++PLY+ QILRAL+ES A+E A RM+AM Sbjct: 211 TTKNSKLLVEKSNIEKNDSDKLPSDIVFEQSPDQLLDSLLPLYLQNQILRALQESAASELACRMTAM 277 HSP 2 Score: 32.3426 bits (72), Expect = 4.646e-12 Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 2 Query: 260 LSLAYNQERQAKITGELLEIVAGA 331 L+L YN+ RQA IT E+LE+V G+ Sbjct: 291 LNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_SYNP2 (ATP synthase gamma chain OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=atpG PE=3 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 4.647e-12 Identity = 29/62 (46.77%), Postives = 41/62 (66.13%), Query Frame = 3 Query: 33 GKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 GK VER EL +F+Q P IL+A++PLY++ Q+LRAL+E A+E A+RM+AM Sbjct: 213 GKFQVEREKVATEVKELPADMIFEQDPKDILNALLPLYLSNQLLRALQEGAASELAARMTAM 274 HSP 2 Score: 37.3502 bits (85), Expect = 4.647e-12 Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 254 KNLSLAYNQERQAKITGELLEIVAGA*AL 340 K L+L+YN+ RQA IT EL E+VAGA AL Sbjct: 286 KTLTLSYNKARQAAITQELSEVVAGANAL 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_PROMS (ATP synthase gamma chain OS=Prochlorococcus marinus (strain AS9601) GN=atpG PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 6.032e-12 Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 21 TTIEGKMIVERPNETFNKGELSPLKL-FDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218 TT + K++VE+ N + E P + F+Q P Q+LD+++PLY+ Q+LRAL+ES A+E A RM+AM Sbjct: 211 TTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAM 277 HSP 2 Score: 32.3426 bits (72), Expect = 6.032e-12 Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 2 Query: 260 LSLAYNQERQAKITGELLEIVAGA 331 L+L YN+ RQA IT E+LE+V G+ Sbjct: 291 LNLTYNKARQAAITQEILEVVGGS 314 The following BLAST results are available for this feature:
BLAST of CF831927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831927 ID=CF831927; Name=CF831927; organism=Citrus sinensis; type=EST; length=502bpback to top |