CF831927
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_PROM9 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9312) GN=atpG PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 6.032e-12 Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = 3
Query: 21 TTIEGKMIVERPNETFNKGELSPLKL-FDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218
TT + K++VE+ N + E P + F+Q P Q+LD+++PLY+ Q+LRAL+ES A+E A RM+AM
Sbjct: 211 TTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAM 277 HSP 2 Score: 32.3426 bits (72), Expect = 6.032e-12 Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 2
Query: 260 LSLAYNQERQAKITGELLEIVAGA 331
L+L YN+ RQA IT E+LE+V G+
Sbjct: 291 LNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_PROM2 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9215) GN=atpG PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 6.032e-12 Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = 3
Query: 21 TTIEGKMIVERPNETFNKGELSPLKL-FDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218
TT + K++VE+ N + E P + F+Q P Q+LD+++PLY+ Q+LRAL+ES A+E A RM+AM
Sbjct: 211 TTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAM 277 HSP 2 Score: 32.3426 bits (72), Expect = 6.032e-12 Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 2
Query: 260 LSLAYNQERQAKITGELLEIVAGA 331
L+L YN+ RQA IT E+LE+V G+
Sbjct: 291 LNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_PROM0 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9301) GN=atpG PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 6.032e-12 Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = 3
Query: 21 TTIEGKMIVERPNETFNKGELSPLKL-FDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218
TT + K++VE+ N + E P + F+Q P Q+LD+++PLY+ Q+LRAL+ES A+E A RM+AM
Sbjct: 211 TTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAM 277 HSP 2 Score: 32.3426 bits (72), Expect = 6.032e-12 Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 2
Query: 260 LSLAYNQERQAKITGELLEIVAGA 331
L+L YN+ RQA IT E+LE+V G+
Sbjct: 291 LNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_SYNS3 (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9311) GN=atpG PE=3 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 1.714e-11 Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 3
Query: 21 TTIEGKMIVERPNETFNKGELSPLKL-FDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218
TT EG++ VE + N P + F+Q P Q+L+A++PLY+ Q+LR+L+ES A+E ASRM+AM
Sbjct: 209 TTKEGRLSVEAGSAPENSQPALPSDIVFEQSPDQLLNALLPLYLQNQLLRSLQESAASELASRMTAM 275 HSP 2 Score: 33.4982 bits (75), Expect = 1.714e-11 Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 2
Query: 254 KNLSLAYNQERQAKITGELLEIVAGA 331
K L+L YN+ RQA IT E+LE+V G+
Sbjct: 287 KTLTLDYNKARQAAITQEILEVVGGS 312
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_PROM4 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9211) GN=atpG PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.714e-11 Identity = 30/67 (44.78%), Postives = 46/67 (68.66%), Query Frame = 3
Query: 21 TTIEGKMIVERPNETFNKGELSPLKL-FDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218
TT +++VE+ N+ P + F+Q P Q+L+A++PLY+ Q+LRAL+ES A+E ASRM+AM
Sbjct: 211 TTKNSRLVVEKDAAPSNEQPKLPSDVVFEQSPDQLLNALLPLYLQNQLLRALQESAASELASRMTAM 277 HSP 2 Score: 34.2686 bits (77), Expect = 1.714e-11 Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 2
Query: 254 KNLSLAYNQERQAKITGELLEIVAGA 331
K L+L YN+ RQA IT E+LE+V G+
Sbjct: 289 KTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_SYNS9 (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9902) GN=atpG PE=3 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 2.226e-11 Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 3
Query: 21 TTIEGKMIVERPNETFNKGELSPLKL-FDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218
TT +G++ VE + N P + F+Q P Q+L+A++PLY+ Q+LR L+ES A+E ASRM+AM
Sbjct: 209 TTDQGRLTVEPGTSSANTAPKIPSDIVFEQSPDQLLNALLPLYLQNQLLRCLQESAASELASRMTAM 275 HSP 2 Score: 33.4982 bits (75), Expect = 2.226e-11 Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 2
Query: 254 KNLSLAYNQERQAKITGELLEIVAGA 331
K L+L YN+ RQA IT E+LE+V G+
Sbjct: 287 KTLTLDYNKARQAAITQEILEVVGGS 312
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_SYNY3 (ATP synthase gamma chain OS=Synechocystis sp. (strain PCC 6803) GN=atpG PE=3 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 2.226e-11 Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 3
Query: 45 VERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218
VE P E+F + +F+Q P QIL+A++PLY Q+LRAL+ES A+E A+RM+AM
Sbjct: 222 VEAPVESFPQD-----MIFEQDPVQILEALLPLYNTNQLLRALQESAASELAARMTAM 274 HSP 2 Score: 36.5798 bits (83), Expect = 2.226e-11 Identity = 18/27 (66.67%), Postives = 23/27 (85.19%), Query Frame = 2
Query: 260 LSLAYNQERQAKITGELLEIVAGA*AL 340
L+L+YN+ RQA IT ELLE+VAGA +L
Sbjct: 288 LTLSYNKARQAAITQELLEVVAGANSL 314
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_SYNPW (ATP synthase gamma chain OS=Synechococcus sp. (strain WH7803) GN=atpG PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 2.889e-11 Identity = 31/67 (46.27%), Postives = 48/67 (71.64%), Query Frame = 3
Query: 21 TTIEGKMIVERPNETFN-KGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218
TT +G + VE + N + ELS +F+Q P Q+L+A++PLY+ Q+LR+L+E+ A+E ASRM+AM
Sbjct: 209 TTKDGDLRVETGSAPANAQPELSSEIVFEQSPDQLLNALLPLYLQNQVLRSLQEAAASELASRMTAM 275 HSP 2 Score: 33.4982 bits (75), Expect = 2.889e-11 Identity = 16/29 (55.17%), Postives = 21/29 (72.41%), Query Frame = 2
Query: 254 KNLSLAYNQERQAKITGELLEIVAGA*AL 340
K L+L YN+ RQA IT E+LE+ GA A+
Sbjct: 287 KTLTLDYNKARQAAITQEILEVAGGAAAV 315
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_SPIPL (ATP synthase gamma chain OS=Spirulina platensis GN=atpG PE=1 SV=2) HSP 1 Score: 50.8322 bits (120), Expect = 2.891e-11 Identity = 27/66 (40.91%), Postives = 43/66 (65.15%), Query Frame = 3
Query: 21 TTIEGKMIVERPNETFNKGELSPLKLFDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218
T+ GK V R + L+ +F+Q P +IL+A++PL++ Q+LRA +ES A+E A+RM+AM
Sbjct: 209 TSKGGKFDVTREKVSVEPEALAQDMIFEQDPVEILNALLPLFLTNQLLRAWQESTASELAARMTAM 274 HSP 2 Score: 38.5058 bits (88), Expect = 2.891e-11 Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 2
Query: 254 KNLSLAYNQERQAKITGELLEIVAGA 331
K L+L+YN+ RQA IT ELLE+VAGA
Sbjct: 286 KTLTLSYNKARQASITQELLEVVAGA 311
BLAST of CF831927 vs. ExPASy Swiss-Prot
Match: ATPG_PROMA (ATP synthase gamma chain OS=Prochlorococcus marinus GN=atpG PE=3 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 6.320e-11 Identity = 27/67 (40.30%), Postives = 46/67 (68.66%), Query Frame = 3
Query: 21 TTIEGKMIVERPNETFNKGELSPLKL-FDQYPAQILDAMMPLYMNRQILRALRESFATEDASRMSAM 218
TT + ++E+ N+ + P + F+Q P Q+L++++PLY+ Q+LRAL+E+ A+E ASRM+AM
Sbjct: 211 TTKGSRFVIEKDPAPANEEPVLPSDVVFEQSPDQLLNSLLPLYLQNQLLRALQEAAASELASRMTAM 277 HSP 2 Score: 35.4242 bits (80), Expect = 6.320e-11 Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 2
Query: 254 KNLSLAYNQERQAKITGELLEIVAGA 331
K L+L YN+ RQA IT E+LE+V GA
Sbjct: 289 KTLNLTYNKARQAAITQEILEVVGGA 314 The following BLAST results are available for this feature:
BLAST of CF831927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831927 ID=CF831927; Name=CF831927; organism=Citrus sinensis; type=EST; length=502bpback to top |