CF831929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.198e-37 Identity = 69/120 (57.50%), Postives = 93/120 (77.50%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP +HFD++ PAFLQIAQ +AGIVPIS+RRVPC K GGIR+T+ G+ YFNLV+++NVGGAGDV +S+KG+K W + RNWGQ WQ++ L G+SL+F++ D R TS +V+P +W Sbjct: 137 PPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDW 256
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.198e-37 Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP HFDMA+PA+ +I YRAGI+P+ ++RVPC KKGG+RFT+NGH YFNLVL+TNV G + S+ + GS T W M RNWG NW S SYL GQ LSF++T DG+T+ N+VP W Sbjct: 148 PPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 267
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 5.455e-37 Identity = 67/119 (56.30%), Postives = 89/119 (74.79%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP +HFDM++PA+ IA Y +GIVP+ + R PC + GGIRF + GH Y+ LVL+TNV G+G V + +KGS T W +MSRNWG+NWQSN+YL GQ+LSF++ A DG VT+ +V P NW Sbjct: 122 PPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANW 240
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 9.305e-37 Identity = 67/120 (55.83%), Postives = 89/120 (74.17%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP HFDMA+PA+ +I YR GI+P+ ++RVPC KKGG+RFT+NGH YF LVL+TNVG AG + ++ +KGSK+ W AM+ NWG W S +YL GQ LSF++T +DG+T+ NVV W Sbjct: 130 PPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGW 249
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.587e-36 Identity = 68/119 (57.14%), Postives = 94/119 (78.99%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP HFDM++PA+ I YRAGIVP+ +++V C ++GG+RFTV+G +YF LVLITNV G+G V ++S+KGSKTGW ++RNWG NWQ NS L GQ+LSF++T++ G+T+ N+VVP W Sbjct: 123 PPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWW 241
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.073e-36 Identity = 63/119 (52.94%), Postives = 87/119 (73.11%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP +HFD++ P FL+IAQY+AG+VP+ +RR+ CA+ GG++F G+ YF ++L NVGGAGD+ + +KG KTGW M +NWGQNW + L GQ +SF++T SDG T NNV+P NW Sbjct: 146 PPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 264
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.073e-36 Identity = 63/119 (52.94%), Postives = 87/119 (73.11%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP +HFD++ P FL+IAQY+AG+VP+ +RR+ CA+ GG++F G+ YF ++L NVGGAGD+ + +KG KTGW M +NWGQNW + L GQ +SF++T SDG T NNV+P NW Sbjct: 139 PPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 257
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 3.536e-36 Identity = 65/119 (54.62%), Postives = 89/119 (74.79%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP +HFD++ FL+IA+Y+AG+VP+ +RR+PC+K GG++F G+ YF +VLI NVGGAGD+ V +KG+KTGW M +NWGQNW + + L GQ LSF++T SDG T NV+P NW Sbjct: 143 PPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNW 261
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 4.618e-36 Identity = 67/119 (56.30%), Postives = 91/119 (76.47%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP HFDMAEPA+LQI Y+AGI+P+ +++V C ++GGIRFT+ G ++F LVL++NV G+G V SVS+KG TGW ++RNWG NWQ NS L GQ+LSF +T++ G+T+ NVVP W Sbjct: 123 PPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWW 241
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 4.618e-36 Identity = 66/120 (55.00%), Postives = 86/120 (71.67%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP HFDMA+PA+ +I Y AGI+P+ ++RVPC KKGG+RFT+NGH YF LVL+TNV AG + S+ + GS T W M+RNWG W S +YL GQ LSF++T +D +T+ NVVP W Sbjct: 135 PPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGW 254 The following BLAST results are available for this feature:
BLAST of CF831929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831929 ID=CF831929; Name=CF831929; organism=Citrus sinensis; type=EST; length=625bpback to top |