CF831929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.292e-35 Identity = 63/119 (52.94%), Postives = 89/119 (74.79%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP +HFD++ FL+IA+Y+AG+VP+ +RR+PC+K GG++F G+ YF +VLI NVGGAGD+ V +K +KTGW M +NWGQNW +++ L GQ LSF++T +DG T NV+P NW Sbjct: 149 PPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNW 267
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.292e-35 Identity = 66/119 (55.46%), Postives = 90/119 (75.63%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP HFDMAEPA+LQI Y+AGIVP+ ++RVPC K+GG+RFT+ G +YF LVLI+NV G+G + SV +KG T +SRNWG NWQS++ L GQ+L+F +T++ G+T+ N+VP W Sbjct: 128 PPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWW 246
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.106e-35 Identity = 64/120 (53.33%), Postives = 94/120 (78.33%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTA-SDGRTVTSNNVVPGNW 623 PP HFDMA+PAF+++A +RAGI+P+++RRVPC + GG+RF G+SY+ L+ + NVGGAGD+ S+++KGS+T W +MS NWG ++Q+ S L GQSLSF++T+ + G T+ + NV P NW Sbjct: 130 PPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANW 249
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.486e-34 Identity = 67/119 (56.30%), Postives = 88/119 (73.95%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP HF + +F +IA ++AG++PI +RRV C + GG+RF V G S+F VLI+NVGGAGDV SV IKG+++GW +M RNWGQ W NS GQ LSF+LT+SDG+T+T+ NVVP W Sbjct: 126 PPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEW 244
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.145e-33 Identity = 63/119 (52.94%), Postives = 86/119 (72.27%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP +HFDM++PA+ +I YRAGIVP+ +RRV C ++GG+RFTV G +F LVL+ NV G+G V +VS++G+ TGW MSRNWG NWQS + L GQ LSF +T + G+ + +V P W Sbjct: 123 PPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGW 241
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 2.802e-33 Identity = 62/119 (52.10%), Postives = 87/119 (73.11%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP +HFD+++P FL+IA+Y+AG+VP+ FRRVPCAK GG++F + G+ +F ++L NVGGAG V ++ IKG++T W AM +NWGQ W + L GQ LSF+LT SDG +V P +W Sbjct: 181 PPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDW 299
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 8.151e-33 Identity = 66/119 (55.46%), Postives = 86/119 (72.27%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP HFDM++PA+ QI Y+AGIVP+ ++RV C ++GG+RFTV G +YF LVLITNV G+G V S IKG+ TGW MSRNWG NWQS + L GQ+LSF +T + G+ + +V P W Sbjct: 124 PPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWW 242
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.065e-32 Identity = 61/115 (53.04%), Postives = 86/115 (74.78%), Query Frame = -3 Query: 267 HFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 611 HFDM++PA+ I Y AGIVPI +++V C + GG+RFT+ G +YF LVL+TN+ G+G + S+S+KGS TGW MSRNWG NWQ + L GQ+LSF +T++ G+T+ ++VVP W Sbjct: 121 HFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGW 235
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.065e-32 Identity = 63/118 (53.39%), Postives = 86/118 (72.88%), Query Frame = -3 Query: 267 PLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 620 P +HF+M+E AFL++A+ +A IVP+ FRRV C + GG+RFT+ G + F VLITNV G+V +V +KGS+TGW M RNWGQNWQ ++ L GQ LSF++T GRTV + +V P +W Sbjct: 130 PKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDW 247
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.390e-32 Identity = 65/119 (54.62%), Postives = 86/119 (72.27%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 623 PP +HF + AF +IA ++AG +P+ +RR+ C K+G +RFTV+G F VLITNV G+GD+ +V IKGS+TGW M RNWGQNW N+ L Q+LSF++T+SD TVTS NV P NW Sbjct: 134 PPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNW 252 The following BLAST results are available for this feature:
BLAST of CF831929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831929 ID=CF831929; Name=CF831929; organism=Citrus sinensis; type=EST; length=625bpback to top |