CF831929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.372e-32 Identity = 59/115 (51.30%), Postives = 86/115 (74.78%), Query Frame = -3 Query: 267 HFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 611 HFDM++PA+ I Y AGI+PI +++V C + GG+RFT+NG +YF LVL+TN+ G+G + S+S+KGS TGW M+RNWG NWQ + L GQ+LSF +T++ G+T+ ++ VP W Sbjct: 121 HFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 235
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.012e-32 Identity = 64/120 (53.33%), Postives = 86/120 (71.67%), Query Frame = -3 Query: 267 PLQHFDMAEPAFLQIAQY-RAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 620 P HFDM+ PAF +IA+ GIVP+ +RRV C ++GG+RFT+ G FN+V+I+NVGG G V SV+++GSK W M+RNWG NWQS+ L GQ LSF++T +D +T T NVVP +W Sbjct: 119 PRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSW 238
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.177e-31 Identity = 62/120 (51.67%), Postives = 88/120 (73.33%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGR-TVTSNNVVPGNW 623 PP HFD+ +PAF++IA ++AGI+P+S+RRV C K GGIRF G+ Y+ LV + NVGG GD+ ++++KGS+TGW MS NWG ++Q+ S L GQSLSF+LT+ R T+ + N P +W Sbjct: 125 PPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASW 244
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 1.537e-31 Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = -3 Query: 267 PLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 620 P +HFD++ P F++IAQ +A +VP+ +RRVPCAK GG++F V G+ +L NVGGAGD+ +VS KGSKT W MSR WGQNW +N L GQS+S ++T SDG T +V+P +W Sbjct: 133 PNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASW 250
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.629e-31 Identity = 58/115 (50.43%), Postives = 85/115 (73.91%), Query Frame = -3 Query: 267 HFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 611 +FDM++PA+ I Y AGIVPI +++V C + GG+RF +NG +YF LVL+TN+ G+G + S+S+KGS TGW M+RNWG NWQ + L GQ+LSF +T++ G+T+ ++ VP W Sbjct: 112 YFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 226
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 9.326e-29 Identity = 57/121 (47.11%), Postives = 87/121 (71.90%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIK-GSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTA-SDGRTVTSNNVVPGNW 623 PP HFD+++PAF+++A +RAGIVP+ +RRVPCA+ GG+RF + G+ Y+ L + NV GAGDV + +K G GW MS NWG ++Q+ + L GQ+LSF++T+ + G+T+ + V P +W Sbjct: 133 PPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASW 253
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.078e-28 Identity = 57/118 (48.31%), Postives = 82/118 (69.49%), Query Frame = -3 Query: 267 PLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 620 P +H +++ AF IA+ RA ++PI +RRV C ++GG+RF+++G S+F VLI+NVG G+V V +KG T W M+RNWGQNW S+ L GQSLSF++T G+T+ S +V P W Sbjct: 126 PKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYW 243
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.714e-28 Identity = 52/117 (44.44%), Postives = 84/117 (71.79%), Query Frame = -3 Query: 267 QHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 614 +HFD+ PAFL IA+ + G+VP+S+R+V C ++GGI++T+ G+ +N+V++ NVGGAGDV +++KG+K W + R+WGQ W++ + L G+SL+F++ D R TS V P +W Sbjct: 162 EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDW 278
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 4.957e-22 Identity = 54/124 (43.55%), Postives = 80/124 (64.52%), Query Frame = -3 Query: 267 PPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG--WQAMSRNWGQNWQSNSYL-NGQSLSFQLT--ASDGRTVTSNNVVPGNW 623 PP HFDMA P+FL++AQ AGIVP+ +RRVPC + GG+RF + G+ Y+ L+ + NVGGAGDV S+S+K S G W + NWG +Q + L N L+ +LT ++ +T+ ++ + W Sbjct: 148 PPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYSTPQQTIIVSDAISPWW 271
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 5.493e-13 Identity = 42/129 (32.56%), Postives = 67/129 (51.94%), Query Frame = -3 Query: 267 HFDMAEPAFLQIAQY-------RAGIVPISFRRVPCAKKGGIRFTVNGHS--YFNLVLITNVGGAGDVHSVSIKGSKTG--WQAMSRNWGQNWQSNSYLN---GQSLSFQLTASDGRTVTSNNVVPGNW 611 HFDM+ AF +A AG++ I ++RVPC + F V+ S Y+ +L+ G GD+ +V I ++ G W+AM ++WG W+ NS S +LT+ G+ + +NNV+P W Sbjct: 133 HFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLSPPFSIRLTSGSGKVLVANNVIPSGW 261 The following BLAST results are available for this feature:
BLAST of CF831929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831929 ID=CF831929; Name=CF831929; organism=Citrus sinensis; type=EST; length=625bpback to top |