CF831931

Overview
NameCF831931
Unique NameCF831931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2291 contig Csv1_Contig2291:93..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.391e-45
Identity = 79/145 (54.48%), Postives = 105/145 (72.41%), Query Frame = -2
Query:  268 GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 702
            G+I +TATNFCPP+   S   G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F   G+ YF ++L  NVGGAGD+  + +KG KTGW  M +NWGQNW +   L GQ +SF++T SDG T   NNV+P NW
Sbjct:  122 GTIKITATNFCPPDY--SKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 264          
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.372e-45
Identity = 78/145 (53.79%), Postives = 112/145 (77.24%), Query Frame = -2
Query:  268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTA-SDGRTVTSNNVVPGNW 699
            S +VTATN CPPN    ++ GGWCNPP  HFDMA+PAF+++A +RAGI+P+++RR+PC + GG+RF   G+SY+ L+ + NVGGAGD+ S+++KGS+T W +MS NWG ++Q+ S L GQSLSF++T+ + G T+ + NV P NW
Sbjct:  105 STVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANW 249          
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 6.903e-45
Identity = 82/144 (56.94%), Postives = 106/144 (73.61%), Query Frame = -2
Query:  268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699
            ++ VTATN CPPN AL +D GGWCNPP  HFDM++PA+ QI  Y+AGIVP+ ++R+ C ++GG+RFTV G +YF LVLITNV G+G V S  IKG+ TGW  MSRNWG NWQS + L GQ+LSF +T + G+ +   +V P  W
Sbjct:   99 AVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWW 242          
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 6.903e-45
Identity = 80/145 (55.17%), Postives = 107/145 (73.79%), Query Frame = -2
Query:  268 GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 702
            GS+ +TATNFCP N + + D   WCNPP +HFD++   FL+IA+Y+AG+VP+ +RRIPC+K GG++F   G+ YF +VLI NVGGAGD+  V +KG+KTGW  M +NWGQNW + + L GQ LSF++T SDG T    NV+P NW
Sbjct:  119 GSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNW 261          
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 6.903e-45
Identity = 83/144 (57.64%), Postives = 106/144 (73.61%), Query Frame = -2
Query:  268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699
            SI+VTATNFC PN  L  D GG CNPP  HF +   +F +IA ++AG++PI +RR+ C + GG+RF V G S+F  VLI+NVGGAGDV SV IKG+++GW +M RNWGQ W  NS   GQ LSF+LT+SDG+T+T+ NVVP  W
Sbjct:  101 SIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEW 244          
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.538e-44
Identity = 79/144 (54.86%), Postives = 108/144 (75.00%), Query Frame = -2
Query:  268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699
            +++VTAT+FC PNL LS+D GGWCN P +HF+M+E AFL++A+ +A IVP+ FRR+ C + GG+RFT+ G + F  VLITNV   G+V +V +KGS+TGW  M RNWGQNWQ ++ L GQ LSF++T   GRTV + +V P +W
Sbjct:  104 TVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDW 247          
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 4.474e-44
Identity = 78/145 (53.79%), Postives = 107/145 (73.79%), Query Frame = -2
Query:  268 GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 702
            GS+ +TATNFCP N + + D   WCNPP +HFD++   FL+IA+Y+AG+VP+ +RRIPC+K GG++F   G+ YF +VLI NVGGAGD+  V +K +KTGW  M +NWGQNW +++ L GQ LSF++T +DG T    NV+P NW
Sbjct:  125 GSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNW 267          
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 9.968e-44
Identity = 78/145 (53.79%), Postives = 106/145 (73.10%), Query Frame = -2
Query:  268 GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 702
            GSI +TATNFCPP+    NDN  WCNPP +HFD+++P FL+IA+Y+AG+VP+ FRR+PCAK GG++F + G+ +F ++L  NVGGAG V ++ IKG++T W AM +NWGQ W +   L GQ LSF+LT SDG      +V P +W
Sbjct:  157 GSIKITATNFCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDW 299          
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.947e-43
Identity = 76/143 (53.15%), Postives = 107/143 (74.83%), Query Frame = -2
Query:  268 IVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGR-TVTSNNVVPGNW 693
            +VTATN CPPN   +++NGGWCNPP  HFD+ +PAF++IA ++AGI+P+S+RR+ C K GGIRF   G+ Y+ LV + NVGG GD+ ++++KGS+TGW  MS NWG ++Q+ S L GQSLSF+LT+   R T+ + N  P +W
Sbjct:  102 VVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASW 244          
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 8.438e-43
Identity = 82/144 (56.94%), Postives = 103/144 (71.53%), Query Frame = -2
Query:  268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699
            SII+TATNFC PN     D GG CNPP +HF +   AF +IA ++AG +P+ +RRI C K+G +RFTV+G   F  VLITNV G+GD+ +V IKGS+TGW  M RNWGQNW  N+ L  Q+LSF++T+SD  TVTS NV P NW
Sbjct:  109 SIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNW 252          
The following BLAST results are available for this feature:
BLAST of CF831931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
EXP25_ARATH1.391e-4554.48Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXPA7_ARATH2.372e-4553.79Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP31_ORYSJ6.903e-4556.94Expansin-A31 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP22_ARATH6.903e-4555.17Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXP10_ORYSJ6.903e-4557.64Expansin-A10 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP16_ORYSJ1.538e-4454.86Expansin-A16 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP26_ARATH4.474e-4453.79Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]
EXP24_ARATH9.968e-4453.79Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=... [more]
EXP18_ARATH4.947e-4353.15Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=... [more]
EXP13_ARATH8.438e-4356.94Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01A12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831931 ID=CF831931; Name=CF831931; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTTTGAACGATATTATACCCGTTCATTCAATTGAAGTAATAACTAT
ATATCTAACACAATCATTTCTATTTATAGAGGCCTAGCGGGTGCCAACAG
ACCACCACAGCAACAAGACAGGCCACATCGGCCAGGCCTGAGCCTCACCT
ACCCCTATTCTCACCCTTCCTCCCTCACAAACAGTGCCAAATTCAATTAA
ATATACAAATTCTGATTCACTTTTTTAAAATCTAAAACTGACCACCCTCA
AAGGTTTGCCCAAATTGCCAATTTCCAGGCACAACATTGTTGCTAGTCAC
AGTCCTGCCGTCACTGGCTGTCAATTGGAAAGAAAGACTTTGGCCGTTAA
GATAAGAATTGCTCTGCCAATTTTGGCCCCAGTTCCTTGACATTGCTTGC
CATCCAGTCTTTGAACCCTTGATTGATACTGAATGTACATCTCCTGCTCC
TCCGACATTTGTGATCAAAACCAGGTTGAAGTATGAGTGTCCATTGACGG
TAAACCTTATTCCTCCTTTCTTCGCACACGGGATCCTTCTGAAGGAAATT
GGGACGATACCGGCGCGGTATTGGGCAATTTGCAAGAAAGCGGGCTCAGC
CATGTCAAAGTGCTGGAGGGGAGGATTGCACCAACCGCCGTTGTCGTTAG
ACAGGGCAAGGTTAGGTGGGCAGAAGTTGGTGGCGGTGACAATGATGGAG
CCG
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