CF832024
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_PYRKO (Elongation factor 2 OS=Pyrococcus kodakaraensis GN=fusA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.121e-16 Identity = 53/153 (34.64%), Postives = 80/153 (52.29%), Query Frame = -1 Query: 387 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGL 845 LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + LNQ+RG + +M++ G + I PV E FGF+G +R ATSG+A +H + P A Q++ IR+RKGL Sbjct: 574 LAKEPVMKVIVRLHDAKIHEDNVHRGPAQIYPAIRSAIHCAMMKAGPVLYEPYQKVIINVPYEYMGAVSRELNQRRGQLI-DMRQEGEVMI-IIGEAPVAEMFGFAGAIRGATSGKAL--WTTEH----AGFKRVPNELAQQIIRQIRQRKGL 718
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_PYRFU (Elongation factor 2 OS=Pyrococcus furiosus GN=fusA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.121e-16 Identity = 52/154 (33.77%), Postives = 81/154 (52.60%), Query Frame = -1 Query: 387 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 845 LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + ++Q+RG + +M++ G + I A PV E FGF+G +R+ATSG+A W + P A Q++ IR+RKGL Sbjct: 574 LAKEPVMKVIVRLVDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGAVSREISQRRGQLI-DMRQEG-EVMTIIAEAPVAEMFGFAGAIRSATSGRAL-------WSTEHAGFKRVPNELAQQIIRQIRQRKGL 718
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_THEGJ (Elongation factor 2 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=fusA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.191e-15 Identity = 53/153 (34.64%), Postives = 80/153 (52.29%), Query Frame = -1 Query: 387 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGL 845 LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + LNQ+RG + +M++ G + I PV E FGF+G +R ATSG+A +H + P A Q++ IR+RKGL Sbjct: 574 LAKEPVMKVIVRLHDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGAVSRELNQRRGQLI-DMRQEGEVMI-IIGEAPVAEMFGFAGAIRGATSGKAL--WTTEH----AGFKRVPNELAQQIIRQIRQRKGL 718
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_THEON (Elongation factor 2 OS=Thermococcus onnurineus (strain NA1) GN=fusA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.032e-15 Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = -1 Query: 387 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 845 LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + +NQ+RG + +M++ G + I + PV E FGF+G LR ATSG+A W + P A ++ IR+RKGL Sbjct: 574 LAKEPVMKVMVRLHDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGSVSREINQRRGQLI-DMRQEGEVMI-IISEAPVAEMFGFAGALRGATSGKAL-------WSTEHAGFKRVPNELAVNIIRQIRQRKGL 718
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.032e-15 Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = -1 Query: 387 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 845 LA E + + + D +H D +HRG Q+ P R I+ + + + P L EP V I P + +G + + Q+RG + +M++ G + I A PV E FGF+G++R+ATSG+A W + P A Q++ IR+RKGL Sbjct: 574 LAREPVMKVIVRLLDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQLV-DMKQEG-EVMTIIAEAPVAEMFGFAGSIRSATSGRAL-------WSTEHAGFKRVPNELAQQIIRQIRQRKGL 718
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_PYRAB (Elongation factor 2 OS=Pyrococcus abyssi GN=fusA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.032e-15 Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = -1 Query: 387 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 845 LA+E + + + D +H D +HRG Q+ P R I+ + + + P L EP V I P + +G + + Q+RG + +M++ G + I A PV E FGF+G +R+ATSG+A W + P A Q++ IR+RKGL Sbjct: 574 LAKEPVMKVIVRLIDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQLV-DMKQEG-EVMTIIAEAPVAEMFGFAGAIRSATSGRAL-------WSTEHAGFKRVPNELAQQIIRQIRQRKGL 718
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_HALSA (Elongation factor 2 OS=Halobacterium salinarium GN=fusA PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.032e-15 Identity = 54/157 (34.39%), Postives = 85/157 (54.14%), Query Frame = -1 Query: 375 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQM 845 LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V ++M + G L ++ PV E GFS +R+AT G+A + +M +D L+ +++ +IR+RKG+K ++ Sbjct: 573 LAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRV-DDMYQEG-DLMVVEGIAPVDEMIGFSSDIRSATEGRASWNTENAGFRVM-ADNLQ-----REIIMEIRERKGMKTEL 721
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_HALS3 (Elongation factor 2 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=fusA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.032e-15 Identity = 54/157 (34.39%), Postives = 85/157 (54.14%), Query Frame = -1 Query: 375 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQM 845 LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V ++M + G L ++ PV E GFS +R+AT G+A + +M +D L+ +++ +IR+RKG+K ++ Sbjct: 573 LAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRV-DDMYQEG-DLMVVEGIAPVDEMIGFSSDIRSATEGRASWNTENAGFRVM-ADNLQ-----REIIMEIRERKGMKTEL 721
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_THESM (Elongation factor 2 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=fusA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15 Identity = 50/154 (32.47%), Postives = 78/154 (50.65%), Query Frame = -1 Query: 387 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 845 LA E + + + D +H D +HRG Q+ P R I+ + + + P L EP V I P + +G + +NQ+RG + +M++ G + I + PV E FGF+G +R ATSG+A W + P A ++ IR+RKGL Sbjct: 574 LAREPVMKVIVRLVDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVVINVPYEYMGSVSREMNQRRGQLI-DMRQEGEVMI-IISEAPVAEMFGFAGAIRGATSGRAL-------WSTEHAGFKRVPTELAINIIRQIRQRKGL 718
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: SN114_YEAST (114 kDa U5 small nuclear ribonucleoprotein component OS=Saccharomyces cerevisiae GN=SNU114 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.537e-14 Identity = 53/169 (31.36%), Postives = 87/169 (51.48%), Query Frame = -1 Query: 387 LAEENMRGICFEVCDVVLHADA-IHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRG-HVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDH--W-----DMMSSDPLEPGTQAAQL-------VADIRKRKGL 845 LAEE + G+ +++ + + +D I Q+IP ++ Y LTA P LLEP+Y V+I L + ++ ++RG +++ ++ GTPL ++ +PVIES GF LR +T+G Q F H W D++ D P + A + V R+RKG+ Sbjct: 808 LAEEPIYGVQYKLLSISVPSDVNIDVMKSQIIPLMKKACYVGLLTAIPILLEPIYEVDITVHAPLLPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGLGMCQLYFWHKIWRKVPGDVLDKDAFIPKLKPAPINSLSRDFVMKTRRRKGI 976 The following BLAST results are available for this feature:
BLAST of CF832024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832024 ID=CF832024; Name=CF832024; organism=Citrus sinensis; type=EST; length=848bpback to top |