CF832024
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_METS3 (Elongation factor 2 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=fusA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19 Identity = 57/156 (36.54%), Postives = 86/156 (55.13%), Query Frame = -1 Query: 378 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQ 845 LA+E G+ F++ D LH DA+HRG QV+P R IYAS ++A P LLEP+ V I P+ +G + +RG + + Q + I++ +PV E FGF+G +R+A G +C++ MS P Q+V +IR+RKGL + Sbjct: 574 LAKEIAMGLKFKLHDAKLHEDAVHRGPAQVLPAIRNAIYASMMSAGPTLLEPMQKVFINTPQDYMGPCTREIQNRRGQIVDMGQE--GDMATIESKVPVAEMFGFAGDIRSAAEG----RCLWS--TEMSGFERLPREMQNQIVKEIRQRKGLSPE 721
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: ETUD1_MOUSE (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Mus musculus GN=Eftud1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.167e-19 Identity = 52/142 (36.62%), Postives = 76/142 (53.52%), Query Frame = -1 Query: 387 GQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPL----------------EPGTQAAQLVADIRKRKGL 764 GQ+I T + + RL+ +Y +I A LG +Y+VL+++ G V +E + GT ++ IKA LPV ESFGF+ +R TSG A PQ VF HW+++ SDP + QA + + +RKRKGL Sbjct: 966 GQLIATMKEACRYALQVKPQRLMAAMYTCDIMATSDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVIPSDPFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGL 1107
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_METKA (Elongation factor 2 OS=Methanopyrus kandleri GN=fusA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.167e-19 Identity = 58/166 (34.94%), Postives = 87/166 (52.41%), Query Frame = -1 Query: 351 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLK-EQMTPLSEFED 845 LA+E RG+ + D +H D +HRG QVIP +R IY L A LLEP+ + + P+ +G + + +RG + EE+Q+ G + IK PV E FGF+ +R+AT G+A ++ + P Q++ +IR+RKGLK E P ED Sbjct: 1097 LAKEPCRGVKVSLVDAEIHEDPVHRGPAQVIPAIKRAIYGGMLLADTHLLEPMQYIYVTVPQDYMGAVTKEIQGRRGTI-EEIQQEGDTVI-IKGKAPVAEMFGFANDIRSATEGRAIWTTEHAGYERV------PEELEEQIIREIRERKGLKPEPPKPEDYIED 1254
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_METVS (Elongation factor 2 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=fusA PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19 Identity = 55/156 (35.26%), Postives = 84/156 (53.85%), Query Frame = -1 Query: 378 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQ 845 LA E +G+ ++ D H DAIHRG Q+IP R + + +AKP LLEP+ + I P+ +G +N +RG + +M++ G + IK +PV E FGF+G +R AT G+ F ++ + P ++VA IR RKGLK + Sbjct: 580 LASERAQGVKIKLIDATFHEDAIHRGPSQIIPAIRFGVRDAVSSAKPILLEPMQKIYINTPQDYMGDAIREINNRRGQIV-DMEQEG-DMAIIKGSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERV------PNEIQTKVVAQIRDRKGLKSE 727
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: ETUD1_HUMAN (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Homo sapiens GN=EFTUD1 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 8.813e-19 Identity = 52/142 (36.62%), Postives = 76/142 (53.52%), Query Frame = -1 Query: 387 GQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPL----------------EPGTQAAQLVADIRKRKGL 764 GQ+I T + + RL+ +Y +I A LG +Y+VL+++ G V +E + GT ++ IKA LPV ESFGF+ +R TSG A PQ VF HW+++ SDP + QA + + +RKRKGL Sbjct: 959 GQLIATMKEACRYALQVKPQRLMAAMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGL 1100
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: RIA1_SCHPO (Ribosome assembly protein 1 OS=Schizosaccharomyces pombe GN=ria1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 50/142 (35.21%), Postives = 80/142 (56.34%), Query Frame = -1 Query: 387 GQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPL-EPGTQ---------------AAQLVADIRKRKGL 764 GQVI + I L PRL+ +Y ++QA + LG +Y V++++RG V +E + GTP + +KA +PV+ESFGF+ + TSG A+PQ +F ++M+ +P P T+ A + + ++RKRKGL Sbjct: 841 GQVISVVKESIRHGFLGWSPRLMLAMYSCDVQATSEVLGRVYGVVSKRRGRVIDEEMKEGTPFFIVKALIPVVESFGFAVEILKRTSGAAYPQLIFHGFEMLDENPFWVPTTEEELEDLGELADRENIAKRYMLNVRKRKGL 982
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_METMP (Elongation factor 2 OS=Methanococcus maripaludis GN=fusA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 55/156 (35.26%), Postives = 86/156 (55.13%), Query Frame = -1 Query: 378 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQ 845 LA E ++G+ + D H DAIHRG Q+IP R + + AKP LLEP+ V I P+ +G +N +RG + +M++ G + IK+ +PV E FGF+G +R AT G+ F ++ + ++ L+P ++ IR RKGLK + Sbjct: 580 LAAEKVQGVKIRLVDATFHEDAIHRGPAQIIPAVRFGVRDAVAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQIL-DMEQEG-DMSIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERVPNE-LQP-----KIAKQIRDRKGLKSE 727
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_METM7 (Elongation factor 2 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=fusA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 55/156 (35.26%), Postives = 86/156 (55.13%), Query Frame = -1 Query: 378 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQ 845 LA E ++G+ + D H DAIHRG Q+IP R + + AKP LLEP+ V I P+ +G +N +RG + +M++ G + IK+ +PV E FGF+G +R AT G+ F ++ + ++ L+P ++ IR RKGLK + Sbjct: 580 LAAEKVQGVKIRLVDATFHEDAIHRGPAQIIPAVRFGVRDAVAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQIL-DMEQEG-DMSIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERVPAE-LQP-----KIAKQIRDRKGLKSE 727
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_METM6 (Elongation factor 2 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=fusA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 55/156 (35.26%), Postives = 86/156 (55.13%), Query Frame = -1 Query: 378 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQ 845 LA E ++G+ + D H DAIHRG Q+IP R + + AKP LLEP+ V I P+ +G +N +RG + +M++ G + IK+ +PV E FGF+G +R AT G+ F ++ + ++ L+P ++ IR RKGLK + Sbjct: 580 LAAEKVQGVKIRLVDATFHEDAIHRGPAQIIPAVRFGVRDAVAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQIL-DMEQEG-DMSIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERVPAE-LQP-----KIAKQIRDRKGLKSE 727
BLAST of CF832024 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 5.713e-18 Identity = 56/156 (35.90%), Postives = 87/156 (55.77%), Query Frame = -1 Query: 378 LAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQ 845 LA E + G+ + D LH D+IHRG QVIP R IY + AK LLEPV V I P++ +G + + Q+RG + E+M++ G + ++ A +PV FGF+ +R AT G+ V ++ + P Q + +V IR+RKGL+++ Sbjct: 575 LANEKVFGVKARLVDAKLHEDSIHRGPAQVIPAGRNSIYGAMCEAKRVLLEPVQRVFINVPQEEMGAAINEIQQRRG-IIEDMKQEGDEI-SLTAKVPVAGMFGFASAIRGATGGK-----VLWSFENAGYQKVPPELQDS-IVRSIRERKGLRQE 722 The following BLAST results are available for this feature:
BLAST of CF832024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832024 ID=CF832024; Name=CF832024; organism=Citrus sinensis; type=EST; length=848bpback to top |