CF832293

Overview
NameCF832293
Unique NameCF832293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2673 contig Csv1_Contig2673:692..1400. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 3.832e-59
Identity = 111/124 (89.52%), Postives = 120/124 (96.77%), Query Frame = -2
Query:  337 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 708
            G ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD +GFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:   26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149          

HSP 2 Score: 67.781 bits (164), Expect = 6.629e-11
Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = -2
Query:  337 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 555
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DGDG I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARK 76          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALM_HALOK (Calmodulin OS=Halichondria okadai PE=2 SV=3)

HSP 1 Score: 228.024 bits (580), Expect = 3.832e-59
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = -2
Query:  337 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 708
            G ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:   26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 149          

HSP 2 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = -2
Query:  337 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 555
            M D  SEE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MTDALSEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALMB_ARBPU (Calmodulin-beta (Fragment) OS=Arbacia punctulata PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.832e-59
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = -2
Query:  337 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 708
            G ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:   15 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 138          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 5.005e-59
Identity = 113/124 (91.13%), Postives = 119/124 (95.97%), Query Frame = -2
Query:  337 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 708
            G ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG INYEEFV++MMAK
Sbjct:   26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELVEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHINYEEFVRMMMAK 149          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 5.005e-59
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = -2
Query:  337 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 708
            G ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:   26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149          

HSP 2 Score: 67.781 bits (164), Expect = 6.629e-11
Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = -2
Query:  337 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 555
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DGDG I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARK 76          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALMB_HALRO (Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3)

HSP 1 Score: 227.639 bits (579), Expect = 5.005e-59
Identity = 111/124 (89.52%), Postives = 118/124 (95.16%), Query Frame = -2
Query:  337 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 708
            G ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M  K
Sbjct:   26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTCK 149          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 226.868 bits (577), Expect = 8.538e-59
Identity = 112/124 (90.32%), Postives = 119/124 (95.97%), Query Frame = -2
Query:  337 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 708
            G ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDG INYEEFV++MMAK
Sbjct:   26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGHINYEEFVRMMMAK 149          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALM_PAXIN (Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3)

HSP 1 Score: 226.483 bits (576), Expect = 1.115e-58
Identity = 110/124 (88.71%), Postives = 119/124 (95.97%), Query Frame = -2
Query:  337 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 708
            G ITTKELGTVMRSLGQNPTE ELQDMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINY+EFVK+M++K
Sbjct:   26 GTITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDEFVKMMLSK 149          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALM_ACHKL (Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3)

HSP 1 Score: 226.483 bits (576), Expect = 1.115e-58
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = -2
Query:  337 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 708
            G ITTKELGTVMRS+GQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+ FDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:   26 GTITTKELGTVMRSVGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFQGFDKDGNGFISAAELRHMMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALM_PATSP (Calmodulin OS=Patinopecten sp. PE=1 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.902e-58
Identity = 110/124 (88.71%), Postives = 119/124 (95.97%), Query Frame = -2
Query:  337 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 708
            G ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD +GFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:   26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149          

HSP 2 Score: 67.781 bits (164), Expect = 6.629e-11
Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = -2
Query:  337 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 555
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DGDG I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARK 76          
The following BLAST results are available for this feature:
BLAST of CF832293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 411
Match NameE-valueIdentityDescription
CALM_RENRE3.832e-5989.52Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_HALOK3.832e-5989.52Calmodulin OS=Halichondria okadai PE=2 SV=3[more]
CALMB_ARBPU3.832e-5989.52Calmodulin-beta (Fragment) OS=Arbacia punctulata P... [more]
CALM_STYLE5.005e-5991.13Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CALM_PYUSP5.005e-5989.52Calmodulin OS=Pyuridae sp. PE=1 SV=2[more]
CALMB_HALRO5.005e-5989.52Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3[more]
CALM_TETPY8.538e-5990.32Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CALM_PAXIN1.115e-5888.71Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3[more]
CALM_ACHKL1.115e-5889.52Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3[more]
CALM_PATSP1.902e-5888.71Calmodulin OS=Patinopecten sp. PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832293 ID=CF832293; Name=CF832293; organism=Citrus sinensis; type=EST; length=709bp
TTTTGATACATACGATAGGAGACATATTTCGACCGAAAGAAAAATAAACA
TCGGAAGGGCAGAAATTAATGAAACACATTAAACAGACAACAACATTCAT
AGAACAGCGGAACAACTAAAATAATAAAAACCGAAAAGTTTTGCGAGTCA
CAAGACATATTGACGAGGGAGACAACATTCTTCCTACACCATCAGGCCCA
TCACCATTAAAAGACCATTGCTTCCTTTAGCCTGACCCTCATGACTATCA
AATTAAAAATTGGAAAAGAGAAAACTAGGAATCCCTTTATAATTTAGTCA
ACCCATTTTATAAGTATTGGTGGGTTGGGGTCATTACTTGGCCATCATAA
CCTTGACAAATTCCTCATAATTTATCTGGCCATCACCATCAACATCAGCT
TCCCTTATCATCTCATCAACTTCTTCATCAGTAAGTTTCTCTCCTAGGTT
TGTCATCACATGGCGCAGCTCAGCAGCTGAGATGAAACCATTCTGATCCT
TGTCGAAAACCCGGAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCC
TTCATCTTCCTGGCCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCC
ATTACCATCAGCATCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAG
TGGGGTTCTGACCCAGTGACCTCATAACAGTGCCAAGCTCCTTGGTGGTA
ATGCAACCG
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