CF832339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP323_ARATH (Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.799e-13 Identity = 35/99 (35.35%), Postives = 61/99 (61.62%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEG 297 G+L AC+IHR +++ E AA +F + + YV + N+YAA+G WD A++R +M+++ + PG S ++V G+ H+F G++ H + + I L G Sbjct: 531 GALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNG 629
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP183_ARATH (Pentatricopeptide repeat-containing protein At2g34370, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H25 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.799e-13 Identity = 58/198 (29.29%), Postives = 90/198 (45.45%), Query Frame = 1 Query: 19 CRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGSE---YVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 603 C + +LELG+ A I + D + L AA + K++ L + + DP K +H F +GD H S +M +GF + +V++++ E + +F S LA A +IN+ P+ V +N+ TC HNT K IS I R + RD + +H +K+G CSC D YW Sbjct: 287 CWVQGYLELGDRFAELIKKLDASRMSKESN-AGLVAAKASDSAMEKLKELRYCQMIRDDP-------KKRMHEFRAGDTSHLGTV---SAFRSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLF--RSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKD--YW 469
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PPR13_ARATH (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.149e-12 Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 1 Query: 1 GSLTIACRIH-RWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLE 294 GSL AC H + L E H+ + + + YV+L N+YAA GKW+ +K+RR M+ GL PG S +E+ +H F++GDN H + I VLE Sbjct: 379 GSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLE 477
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.149e-12 Identity = 34/103 (33.01%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 4 SLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKM 312 +L AC+ + L + AA +I + D + +VLLC+++A+SG W+ A +R M++ + PG SW+E++ ++H F + D FHP+ +I +VL + +M Sbjct: 647 TLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP119_ARATH (Putative pentatricopeptide repeat-containing protein At1g74400 OS=Arabidopsis thaliana GN=PCMP-E68 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.149e-12 Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 16 ACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSG-DNFHPQIK--EINSVL 291 AC +H +ELGE IFE D HVG YV L N+YA+ G WDE +K+R +R++ + PG SW+E+ ++ F+SG DN Q+ EI+ VL Sbjct: 353 ACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM---PGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVL 444
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PPR15_ARATH (Pentatricopeptide repeat-containing protein At1g06145 OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 37/110 (33.64%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGL-TIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGF 327 G+L CRIH+ L + E+A + + + GYY LL ++YA +W +VA++R MRE G+ I PG S + + H F + D H E+ +L+ Y++M G+ Sbjct: 460 GALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGY 569
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP202_ARATH (Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 1 Query: 16 ACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAF 240 AC H+ E GEL A H+ + YVLL N+YA+ G W +V +VR +M+E+ + PGCSW+E+ G VH F Sbjct: 528 ACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PPR83_ARATH (Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 39/110 (35.45%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 1 GSLTIACRIHRWLEL-GELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGF 327 G++ AC+ H+ L LAA + E + VG YV+L +YAA GKW + A+VR++MR G + G SW+ V+ +V +F D P + SVL E+ + G+ Sbjct: 487 GAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGY 596
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP357_ARATH (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 38/106 (35.85%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 4 SLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAV 321 SL C +EL E AA +D + G + +L N+YA+ G W E KVR M+ +G+ +PG SW+ + EVH FLS D H + +I VL+ +++ V Sbjct: 728 SLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGV 833
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP197_ARATH (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana GN=PCMP-E26 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 41/102 (40.20%), Postives = 53/102 (51.96%), Query Frame = 1 Query: 7 LTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKM 312 L A R H +ELG L+A + + YV L NLY +G +E AK+ LM+EKGL PGCSW+EV + F SG + P EI +VL M Sbjct: 752 LLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853 The following BLAST results are available for this feature:
BLAST of CF832339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832339 ID=CF832339; Name=CF832339; organism=Citrus sinensis; type=EST; length=692bpback to top |