CF832339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.343e-12 Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVK 222 G+L AC H ++LGE+AA +FE + + G YVLL N+YAA G+W ++ KVR +M GL PG S +E++ Sbjct: 597 GALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.343e-12 Identity = 37/107 (34.58%), Postives = 56/107 (52.34%), Query Frame = 1 Query: 7 LTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGF 327 L AC+ H ELG A + +R YV L +Y A G+ +V +V + MR G++ + GCSW+E+K + H F+ GD HP I+E ++ +M GF Sbjct: 598 LLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGF 704
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLE 294 G+L A R+H + ELAA I E + + Y LLCN+YA +W ++ +VRR + + + PG S +EV G H F++GD H Q +EI LE Sbjct: 541 GALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLE 638
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP191_ARATH (Pentatricopeptide repeat-containing protein At2g37310 OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 31/92 (33.70%), Postives = 52/92 (56.52%), Query Frame = 1 Query: 37 LELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKM 312 LE+ A +FE + + G Y ++ NLY +G+W+E VR M+ GL PG SW+E + + +F++ D+ + KE+ ++EG E M Sbjct: 551 LEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESM 642
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PPR80_ARATH (Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12 Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAV 321 GSL A + H ++L ELAA + E + YV+L LY+ GK + ++ + + K + DPG SW+ +KGEVH FL+GD ++EI L+ ++M+ + Sbjct: 611 GSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEMELI 717
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP253_ARATH (Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.271e-11 Identity = 38/106 (35.85%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 4 SLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAV 321 +L C HR L +G++AA I + + +G L+ N +A + KW EVAKVR+LMR + PG S +EV GE+ FL D H + + VL +++ V Sbjct: 491 ALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIRDV 596
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP277_ARATH (Pentatricopeptide repeat-containing protein At3g50420 OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11 Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 1 Query: 4 SLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEV-KGEVHAFLSGDNFHPQI 270 +L AC R L++G AA I + D ++LL NLYA +G+W++VA++RR +R + DPG SW+EV F SGD +P++ Sbjct: 677 TLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEV 766
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PPR65_ARATH (Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 34/98 (34.69%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 4 SLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNF--HPQIKEINSVL 291 SL A R + +++ E A + + + + LL ++YA++ +W++V VRR M++ G+ PGCS +E+ G H F+ GD+ HP++ EINS+L Sbjct: 456 SLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553 The following BLAST results are available for this feature:
BLAST of CF832339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832339 ID=CF832339; Name=CF832339; organism=Citrus sinensis; type=EST; length=692bpback to top |