CF832392

Overview
NameCF832392
Unique NameCF832392
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7736 contig Csv1_Contig7736:499..1331. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 357.836 bits (917), Expect = 4.188e-98
Identity = 179/187 (95.72%), Postives = 183/187 (97.86%), Query Frame = -1
Query:  273 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 833
            GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY  GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGK+TIVLHNTCEDSLLAAPI+LDLVLLAELSTRIQLKAEGE KFHSFHPVATILSYLTKAPLVPPGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  324 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYELGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEEKFHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 4.188e-98
Identity = 178/187 (95.19%), Postives = 182/187 (97.33%), Query Frame = -1
Query:  273 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 833
            GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY PGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGK+TIVLHNTCEDSLL API+LDLVLLAELSTRIQLKAEGE K HSFHPVATILSYLTKAPLVPPGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  324 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYEPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTIVLHNTCEDSLLRAPIILDLVLLAELSTRIQLKAEGEDKLHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 355.91 bits (912), Expect = 1.592e-97
Identity = 176/187 (94.12%), Postives = 182/187 (97.33%), Query Frame = -1
Query:  273 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 833
            GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPYV DSKRAMDEYTSEIFMGGKNTIV+HNTCEDSLLAAPI+LDLVLLAE+STRIQ K+E EGKFHSFHPVAT LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  324 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPYVADSKRAMDEYTSEIFMGGKNTIVMHNTCEDSLLAAPIILDLVLLAEISTRIQFKSEKEGKFHSFHPVATKLSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 6.048e-97
Identity = 174/187 (93.05%), Postives = 181/187 (96.79%), Query Frame = -1
Query:  273 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 833
            GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV SNGILY PGEHPDHVVVIKYVP VGDSKRAMDEYTSEIFMGGKNTIV+HNTCEDSLLAAPI+LDLVLLAEL+TRIQ  +E EGKFHSFHPVAT+LSYL+KAPLVPPGTPVVNALSKQRAMLEN+LRACVGLAPENNMILEYK
Sbjct:  324 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVGSNGILYEPGEHPDHVVVIKYVPCVGDSKRAMDEYTSEIFMGGKNTIVMHNTCEDSLLAAPIILDLVLLAELTTRIQFMSENEGKFHSFHPVATLLSYLSKAPLVPPGTPVVNALSKQRAMLENVLRACVGLAPENNMILEYK 510          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.070e-85
Identity = 168/188 (89.36%), Postives = 171/188 (90.96%), Query Frame = -1
Query:  273 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYG-PGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 833
            GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN    G     P     IKYVPYV   +RAMDEYTSEIFMGGK+TIVLHNTCEDSLLAAPI+LDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  324 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNVFFMGLVNTRPRW---IKYVPYVA-IERAMDEYTSEIFMGGKSTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 507          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.655e-78
Identity = 140/186 (75.27%), Postives = 164/186 (88.17%), Query Frame = -1
Query:  273 AGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 830
            AGIKP SIVSYNHLGNNDG NLSAPQ FRSKEI+KSNVVDDM++SN ILY  GEHPDHV+VIKYVPYVGDSKRAMDEYTS+IFMGG NTIVLHNTCEDSLLAAPI+LDLV+LAE+++RI +K + + +F +FHPV ++LSYL KAP+VP    VVNAL KQRA +ENI +ACVG+AP+NNM+LE +
Sbjct:  325 AGIKPVSIVSYNHLGNNDGKNLSAPQQFRSKEITKSNVVDDMIASNNILYKQGEHPDHVIVIKYVPYVGDSKRAMDEYTSQIFMGGHNTIVLHNTCEDSLLAAPIILDLVILAEVTSRITMKKQDDDQFATFHPVLSLLSYLLKAPIVPKHATVVNALFKQRACIENIFKACVGIAPDNNMLLEQR 510          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 4.076e-77
Identity = 141/186 (75.81%), Postives = 159/186 (85.48%), Query Frame = -1
Query:  273 AGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 830
            AG+KP SIVSYNHLGNNDG NLSAPQ FRSKEISKSNVVDDMV SN ILYGP E PDH VVIKYVPYVGDSKRAMDEYTSEI MGG NTIVLHNTCEDSLLA+PI+LDLVLL EL  RI  + E + +F +FH V +ILS+L KAPLVP GTPV+NA  +QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  319 AGLKPVSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVQSNPILYGPNEKPDHCVVIKYVPYVGDSKRAMDEYTSEIMMGGANTIVLHNTCEDSLLASPIILDLVLLTELCQRITFRTETDQEFQTFHSVLSILSFLCKAPLVPAGTPVINAFFRQRNCIENILRACLGLSPQNHMMLEHK 504          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 286.96 bits (733), Expect = 9.080e-77
Identity = 142/186 (76.34%), Postives = 158/186 (84.95%), Query Frame = -1
Query:  273 AGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 830
            AG+KP SIVSYNHLGNNDG NLSAPQ FRSKEISKSNVVDDMV SN ILYGP E PDH VVIKYVPYVGDSKRAMDEYTSEI MGG NTIVLHNTCEDSLLA+PI LDLVLL EL  RI  + E + +F +FH V +ILS+L KAPLVP GTPVVNA  +QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  319 AGLKPVSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVQSNPILYGPNEKPDHCVVIKYVPYVGDSKRAMDEYTSEIMMGGANTIVLHNTCEDSLLASPIFLDLVLLTELCQRITFRTETDQEFQTFHSVLSILSFLCKAPLVPAGTPVVNAFFRQRNCIENILRACLGLSPQNHMMLEHK 504          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.473e-74
Identity = 141/189 (74.60%), Postives = 160/189 (84.66%), Query Frame = -1
Query:  273 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLK-AEGE-GKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 833
            GAGIKP SI SYNHLGNNDG NLSAPQ FRSKEISKSNVVDDMV+SN +LYGP EHPDHVVVIKYVPYVGDSKRAMDEYTSEI MGG NT+V+HNTCEDSLLA P++LDLV+L ELSTRIQL+ AE E   +  F PV ++LSYL KAPLVP G+ VVN+L +QRA +ENILR C+GL P ++M LE +
Sbjct:  325 GAGIKPVSIASYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYGPDEHPDHVVVIKYVPYVGDSKRAMDEYTSEIMMGGHNTLVIHNTCEDSLLATPLILDLVILGELSTRIQLRNAEKESAPWVPFKPVLSLLSYLCKAPLVPQGSQVVNSLFRQRAAIENILRGCIGLPPISHMTLEQR 513          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 7.194e-74
Identity = 132/187 (70.59%), Postives = 158/187 (84.49%), Query Frame = -1
Query:  273 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 833
            G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE+SKSNVVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDL LL EL  R+    + + +  +FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENILRAC+GL P+N+M+LE+K
Sbjct:  321 GSGLKTMSIVSYNHLGNNDGENLSAPLQFRSKEVSKSNVVDDMVQSNPVLYAPGEEPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDADPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACLGLPPQNHMLLEHK 507          
The following BLAST results are available for this feature:
BLAST of CF832392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_ORYSJ4.188e-9895.72Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_HORVU4.188e-9895.19Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_BRANA1.592e-9794.12Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO3_ARATH6.048e-9793.05Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_CITPA1.070e-8589.36Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_DICDI1.655e-7875.27Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1A_XENLA4.076e-7775.81Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1B_XENLA9.080e-7776.34Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1_DROME2.473e-7474.60Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1_MACFA7.194e-7470.59Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01M15_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832392 ID=CF832392; Name=CF832392; organism=Citrus sinensis; type=EST; length=833bp
TTTTTTTTTTTTTTATTTATGAACTTCCATATATTATCTACTTGCCATAC
AAGAGATTTCATGCTCCGAAATGAGCTACAAAGGCAATGGGCTACACTCC
AGCACCTTCATTAAAAAAATAAAAGAGCAAACATACAGGACACACTAATA
TTAACCACAATTTCATGACACAAGACATTACAATCAGTAATTAAATGGAC
CACCACAGCTTTGATTGGTGACAGAGAAAGGGAAAACCGGTTCTTCCACT
TTTCTCCCCTGCAAGTTCTTCACTTGTATTCCAAAATCATGTTGTTCTCA
GGAGCCAAGCCAACGCAAGCCCTCAGAATGTTCTCAAGCATTGCACGCTG
CTTCGACAGCGCATTCACCACTGGTGTGCCTGGAGGGACCAGAGGAGCCT
TGGTGAGGTAGCTGAGAATTGTAGCCACAGGGTGGAAAGAGTGGAATTTG
CCCTCTCCTTCAGCTTTGAGCTGGATCCTGGTGCTGAGTTCAGCCAGCAG
AACCAAATCTAGAACGATTGGAGCAGCCAAAAGAGAGTCCTCACACGTGT
TGTGCAGCACAATGGTGTTCTTGCCACCCATGAAAATTTCTGATGTGTAC
TCATCCATGGCTCTCTTGCTATCGCCAACATATGGCACATACTTGATGAC
CACAACGTGGTCGGGGTGTTCACCAGGCCCATAAAGGATACCATTGCTGG
AGACCATGTCATCAACAACATTACTTTTGGAAATCTCCTTGGAGCGGAAG
GTTTGAGGGGCTGAAAGATTCATTCCATCATTGTTTCCCAAGTGGTTGTA
GCTAACAATTGATGTTGGCTTGATTCCTGCCCC
back to top