CF832392

Overview
NameCF832392
Unique NameCF832392
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7736 contig Csv1_Contig7736:499..1331. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.227e-73
Identity = 133/187 (71.12%), Postives = 158/187 (84.49%), Query Frame = -1
Query:  273 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 833
            G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE+SKSNVVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDL LL EL  R+    + + +  +FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  321 GSGLKTMSIVSYNHLGNNDGENLSAPLQFRSKEVSKSNVVDDMVQSNPVLYTPGEEPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDMDPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 1.603e-73
Identity = 131/187 (70.05%), Postives = 157/187 (83.96%), Query Frame = -1
Query:  273 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 833
            G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE++KS+VVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDLVLL EL  R+    + + +   FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  321 GSGLKTMSIVSYNHLGNNDGQNLSAPLQFRSKEVTKSSVVDDMVQSNRVLYAPGEEPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLVLLTELCQRVSFCTDSDPEPQGFHPVLSVLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.039e-72
Identity = 131/187 (70.05%), Postives = 155/187 (82.89%), Query Frame = -1
Query:  273 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 833
            G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE+SKS+VVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDL LL EL  R+    + +    SFHPV ++L +L KAPL PPG+PVVNAL +QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  321 GSGLKTMSIVSYNHLGNNDGQNLSAPPQFRSKEVSKSSVVDDMVHSNPVLYSPGEQPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDVDPDPQSFHPVLSLLGFLFKAPLAPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.314e-72
Identity = 130/187 (69.52%), Postives = 156/187 (83.42%), Query Frame = -1
Query:  273 GAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 833
            G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE++KS+VVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDLVLL EL  R+    + + +   FH V ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  321 GSGLKTMSIVSYNHLGNNDGQNLSAPLQFRSKEVTKSSVVDDMVHSNHVLYAPGERPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLVLLTELCQRVSFCTDSDPEPQGFHTVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 2.571e-55
Identity = 110/191 (57.59%), Postives = 135/191 (70.68%), Query Frame = -1
Query:  279 AGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGP--GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLK-----AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILE 830
            AGIKP SI SYNHLGNNDG NLSAP+ FRSKEISKS+V+DD+++SN ILY    G+  DH +VIKY+  VGDSK AMDEY SE+ +GG N I +HN CEDSLLA P+++DL+++ E  TR+  K      E  GKF +F+PV T LSY  KAPL  PG   VN L+KQR  LEN LR  +GL  +N +  E
Sbjct:  339 AGIKPVSIASYNHLGNNDGYNLSAPKQFRSKEISKSSVIDDIIASNDILYNDKLGKKVDHCIVIKYMKPVGDSKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQNELRFE 529          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.727e-55
Identity = 105/186 (56.45%), Postives = 134/186 (72.04%), Query Frame = -1
Query:  279 AGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGP--GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILE 830
            AGIKP SI SYNHLGNNDG NLS+P+ FRSKEISK +VVDD++ SN +LY    G+  DH +VIKY+P VGDSK AMDEY SE+ +GG N I +HN CEDSLLA P+++DLV+  E +TR+Q+K  G+  +   +PVA++LSY  KAPL  PG   +N L+KQR  L N+L   VGL  +N +  E
Sbjct:  331 AGIKPLSIASYNHLGNNDGYNLSSPKQFRSKEISKQSVVDDIIESNELLYNKESGDKVDHCIVIKYLPAVGDSKVAMDEYYSELMLGGHNKISIHNVCEDSLLATPLIIDLVVATEFATRVQVKGPGKSDYDELYPVASLLSYWLKAPLARPGFKPINGLNKQRQQLVNLLSVLVGLPIDNELRFE 516          
BLAST of CF832392 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.474e-52
Identity = 103/184 (55.98%), Postives = 130/184 (70.65%), Query Frame = -1
Query:  306 AGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGP--GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLK-------AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGL 830
            AGI+P SI SYNHLGNNDG NLS+PQ FRSKEISK++VVDD++ SN ILY    G   DH +VIKY+  VGDSK AMDEY SE+ +GG N I +HN CEDSLLA P+++DL+++ E  +R+  +       AE +G F +F+PV + LSY  KAPL  PG   +N L+KQR  LEN LR  +GL
Sbjct:  342 AGIRPVSIASYNHLGNNDGYNLSSPQQFRSKEISKASVVDDIIESNPILYNDKLGNKIDHCIVIKYMHAVGDSKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLIIDLIVMTEFCSRVTYRNVDGQDGAEAKGDFENFYPVLSFLSYWLKAPLTKPGYQPINGLNKQRTALENFLRLLIGL 525          
The following BLAST results are available for this feature:
BLAST of CF832392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_HUMAN1.227e-7371.12Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_RAT1.603e-7370.05Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1_BOVIN1.039e-7270.05Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1_MOUSE2.314e-7269.52Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_YEAST2.571e-5557.59Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]
INO1_CANAL5.727e-5556.45Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_CANGA3.474e-5255.98Inositol-3-phosphate synthase OS=Candida glabrata ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M15_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832392 ID=CF832392; Name=CF832392; organism=Citrus sinensis; type=EST; length=833bp
TTTTTTTTTTTTTTATTTATGAACTTCCATATATTATCTACTTGCCATAC
AAGAGATTTCATGCTCCGAAATGAGCTACAAAGGCAATGGGCTACACTCC
AGCACCTTCATTAAAAAAATAAAAGAGCAAACATACAGGACACACTAATA
TTAACCACAATTTCATGACACAAGACATTACAATCAGTAATTAAATGGAC
CACCACAGCTTTGATTGGTGACAGAGAAAGGGAAAACCGGTTCTTCCACT
TTTCTCCCCTGCAAGTTCTTCACTTGTATTCCAAAATCATGTTGTTCTCA
GGAGCCAAGCCAACGCAAGCCCTCAGAATGTTCTCAAGCATTGCACGCTG
CTTCGACAGCGCATTCACCACTGGTGTGCCTGGAGGGACCAGAGGAGCCT
TGGTGAGGTAGCTGAGAATTGTAGCCACAGGGTGGAAAGAGTGGAATTTG
CCCTCTCCTTCAGCTTTGAGCTGGATCCTGGTGCTGAGTTCAGCCAGCAG
AACCAAATCTAGAACGATTGGAGCAGCCAAAAGAGAGTCCTCACACGTGT
TGTGCAGCACAATGGTGTTCTTGCCACCCATGAAAATTTCTGATGTGTAC
TCATCCATGGCTCTCTTGCTATCGCCAACATATGGCACATACTTGATGAC
CACAACGTGGTCGGGGTGTTCACCAGGCCCATAAAGGATACCATTGCTGG
AGACCATGTCATCAACAACATTACTTTTGGAAATCTCCTTGGAGCGGAAG
GTTTGAGGGGCTGAAAGATTCATTCCATCATTGTTTCCCAAGTGGTTGTA
GCTAACAATTGATGTTGGCTTGATTCCTGCCCC
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