CF832446

Overview
NameCF832446
Unique NameCF832446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:36..634. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.244e-51
Identity = 97/149 (65.10%), Postives = 114/149 (76.51%), Query Frame = 2
Query:  152 KVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            KV FD+ I G PAG+IVM L+    PKTAENFRALCTGEKG+G+SGKPLH+KGS+FHR+IP+FM Q            ESIYG KF DENF+ KHTGPG+LSMANAG +TNGSQFFI TV T WLDG+HVVFG+V+  +DVV  +E  G
Sbjct:    6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIG 154          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 6.174e-51
Identity = 99/149 (66.44%), Postives = 108/149 (72.48%), Query Frame = 2
Query:  152 KVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            KV FDV I  +PAGR+ M LF   VPKTAENFRALCTGEKG+G+ G  LH+KGS FHRIIP FM+Q            ESIYG KF DENF LKHTGPG LSMANAGP+TNGSQFFI TV T WLDG HVVFG+V   M VV K+E  G
Sbjct:   23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMG 171          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 8.063e-51
Identity = 98/152 (64.47%), Postives = 111/152 (73.03%), Query Frame = 2
Query:  143 ITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            +  KV FD+ +  K AGRIVM L+   VP+TAENFRALCTGE+GIGKSGKPLHYKGS FHR+IP FM Q            ESIYG KF DENF  KHTGPG+LSM NAG +TNGSQFFI T  TSWLDG+HVVFG+V+  MDVV  +E  G
Sbjct:    2 VNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVG 153          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 8.063e-51
Identity = 96/149 (64.43%), Postives = 113/149 (75.84%), Query Frame = 2
Query:  152 KVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            KV FD+ I G+PAGRIVM L+    P+TAENFRALCTGEKG+G +GKPLH+KGS FHR+IP+FM Q            ESIYG KF DENF+ KHTGPG+LSMANAG +TNGSQFFI TV T WLDG+HVVFG+V+  +DVV  +E  G
Sbjct:    5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVG 153          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.375e-50
Identity = 99/156 (63.46%), Postives = 115/156 (73.72%), Query Frame = 2
Query:  122 SDQNLKEITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            S  ++K+  ++V FD+ I GK AGRIV  L+   VPKTAENFRALCTGEKG+GK GKPLHYKGSTFHR+I  FM+Q            ESIYG KF DENF+LKH  P LLSMANAGP TNGSQFF+TTV T  LDG+HVVFG+VLS   VV ++E
Sbjct:    3 STDDVKQARSRVFFDITIGGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVVRQIE 158          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 198.749 bits (504), Expect = 1.796e-50
Identity = 108/179 (60.34%), Postives = 123/179 (68.72%), Query Frame = 2
Query:   53 LLPLTMLWAVILLATFSIILAKKSDQNLKEITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            LL  T+    +LL   S   AK       +IT+KV FD+E   KP GRIVMGL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I  FM+Q            +SIYG+KFPDENFKLKH+  GLLSMANAG DTNGSQFFITTV TSWLDG+HVVFG+VL   DVV K+E
Sbjct:    8 LLAATLFLGAMLLFAQSAEAAKGP-----KITHKVYFDIEQGDKPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKQFMIQGGDFTKGDGTGGKSIYGDKFPDENFKLKHSKKGLLSMANAGKDTNGSQFFITTVITSWLDGKHVVFGEVLEGYDVVEKIE 174          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.796e-50
Identity = 96/149 (64.43%), Postives = 111/149 (74.50%), Query Frame = 2
Query:  152 KVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            KV FD+ + GK AGRIVM L+    P+TAENFRALCTGE+GIGK GKPLHYKGS+FHR+IP FM Q            ESIYG KF DENF  KHTGPG+LSMANAG +TNGSQFFI T  TSWLDG+HVVFG+V+  ++VV  +E  G
Sbjct:    6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVG 154          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.826e-50
Identity = 94/150 (62.67%), Postives = 113/150 (75.33%), Query Frame = 2
Query:  149 NKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            +KV FD+ I    AGRIVM LF +  PKTAENFRALCTGEKG+GK+GKPLH+KGS FHR+I  FM Q            ESIYGEKF DENF+LKH  PGLLSMANAGP+TNGSQFF+T V   WLDG+HVVFG+V+  ++++ ++EA G
Sbjct:    3 SKVFFDITIGSDTAGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEVVEGLEILEQLEANG 152          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 8.915e-50
Identity = 100/149 (67.11%), Postives = 112/149 (75.17%), Query Frame = 2
Query:  143 ITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            ITNKV FD+E  GKP GRIVMGL+GK VPKTAENFRAL TG+   G+      Y+GS+FHRII +FM+Q            +SIYG KFPDENFKLKHTGPG+LSMANAG DTNGSQFFI TV T+WLD RHVVFG VL  MDVVY +E
Sbjct:   43 ITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGED-LGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAME 190          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.164e-49
Identity = 102/171 (59.65%), Postives = 120/171 (70.18%), Query Frame = 2
Query:   77 AVILLATFSIILAKKSDQNLKEITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            +VI LA  ++     +  N K +TNKV FD++   K  GRIV+GL+G+ VPKT ENFRAL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+F DENFKL+HTGPG+LSMANAG DTNGSQFFITTVTTSWLDGRHVVFGKV+  MDVV  +E
Sbjct:    7 SVIFLAIVALATLVSASTNPK-VTNKVYFDIKQGDKDLGRIVLGLYGEVVPKTVENFRALATGEKGYG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKVIEGMDVVTAIE 169          
The following BLAST results are available for this feature:
BLAST of CF832446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
CP19B_ARATH1.244e-5165.10Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CYP1_CAEEL6.174e-5166.44Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
CYPH_BRANA8.063e-5164.47Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CP18C_ARATH8.063e-5164.43Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
PPID_NEUCR1.375e-5063.4641 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
PPIB_NEUCR1.796e-5060.34Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
CP19A_ARATH1.796e-5064.43Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
PPI2_SYNY36.826e-5062.67Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
PPIB_CRYNE8.915e-5067.11Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIB_ORPSP1.164e-4959.65Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832446 ID=CF832446; Name=CF832446; organism=Citrus sinensis; type=EST; length=599bp
GCCGGTGACTGCAGAATGAGAAACAACGAAGTGATATATGGCTTCAACAA
ATTTGCTTCCACTCACGATGCTATGGGCTGTTATCCTGTTGGCCACTTTC
TCTATAATTCTGGCGAAAAAATCGGATCAGAATTTGAAAGAAATCACAAA
CAAAGTTGACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTG
TAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGA
GCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCA
CTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAG
GAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGA
GAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCT
TTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCA
TTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGA
AAGGTGCTATCGGTGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGA
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