CF832446

Overview
NameCF832446
Unique NameCF832446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:36..634. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.246e-11
Identity = 49/125 (39.20%), Postives = 62/125 (49.60%), Query Frame = 2 
Query:  188 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL 559
            +G I + L  +  PK   NF  L   +KG        +YK  TFHR I  FM+Q            ESI+G+ F DE    LKH   G LSMAN G +TN SQFFI       L+ +H +FG V+
Sbjct:  308 SGDINLELQTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPSGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVI 421
[Close]
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus fumigatus GN=cyp8 PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.246e-11
Identity = 48/124 (38.71%), Postives = 61/124 (49.19%), Query Frame = 2 
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL 559
            G + + L  +  PK   NF  L   +KG        +YK  TFHR I  FM+Q            ESI+G+ F DE    LKH   G LSMAN G +TN SQFFI       L+ +H +FG V+
Sbjct:  322 GDVNLELHTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPTGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVI 434
The following BLAST results are available for this feature:
BLAST of CF832446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIL2_ASPOR6.246e-1139.20Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIL2_ASPFU6.246e-1138.71Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832446 ID=CF832446; Name=CF832446; organism=Citrus sinensis; type=EST; length=599bp
GCCGGTGACTGCAGAATGAGAAACAACGAAGTGATATATGGCTTCAACAA
ATTTGCTTCCACTCACGATGCTATGGGCTGTTATCCTGTTGGCCACTTTC
TCTATAATTCTGGCGAAAAAATCGGATCAGAATTTGAAAGAAATCACAAA
CAAAGTTGACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTG
TAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGA
GCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCA
CTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAG
GAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGA
GAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCT
TTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCA
TTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGA
AAGGTGCTATCGGTGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGA
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