CF832446

Overview
NameCF832446
Unique NameCF832446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:36..634. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 1.628e-43
Identity = 90/148 (60.81%), Postives = 101/148 (68.24%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            V FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV   M++V  +E  G
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 1.628e-43
Identity = 90/148 (60.81%), Postives = 101/148 (68.24%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            V FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV   M++V  +E  G
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 1.628e-43
Identity = 90/148 (60.81%), Postives = 101/148 (68.24%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            V FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV   M++V  +E  G
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 1.628e-43
Identity = 90/148 (60.81%), Postives = 101/148 (68.24%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            V FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV   M++V  +E  G
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_CERAE (Peptidyl-prolyl cis-trans isomerase A OS=Cercopithecus aethiops GN=PPIA PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 1.628e-43
Identity = 90/148 (60.81%), Postives = 101/148 (68.24%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            V FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV   M++V  +E  G
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_BOVIN (Peptidyl-prolyl cis-trans isomerase A OS=Bos taurus GN=PPIA PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 1.628e-43
Identity = 90/148 (60.81%), Postives = 101/148 (68.24%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            V FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV   M++V  +E  G
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.778e-43
Identity = 90/149 (60.40%), Postives = 104/149 (69.80%), Query Frame = 2
Query:  143 ITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            I NKV F ++    P GR+V  L+   VPKTAENFRALCTGEKGIGKSGKPLHYKGS+FHR+I +FM+Q            ESIYG  F DENF +KH   G LSMANAG +TNGSQFFITT  T  L+G H VFG+V+   D+V KVE
Sbjct:    5 IRNKVFFQIKQGNTPLGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVVEGFDIVKKVE 152          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_RAT (Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 2.778e-43
Identity = 90/148 (60.81%), Postives = 100/148 (67.57%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            V FD+   G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS+FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV   M +V  +E  G
Sbjct:    6 VFFDITADGEPLGRVCFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMSIVEAMERFG 146          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_CRIGR (Peptidyl-prolyl cis-trans isomerase A OS=Cricetulus griseus GN=PPIA PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 2.778e-43
Identity = 90/148 (60.81%), Postives = 100/148 (67.57%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            V FD+   G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS+FHRIIP FM Q             SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV   M++V  +E  G
Sbjct:    6 VFFDISADGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.738e-43
Identity = 87/145 (60.00%), Postives = 101/145 (69.66%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            V FD+ I G+ AGR+   L+   VPKTAENFRALCTGEKG+G+SGKPL YKGS FHR+I  FM Q            ESIYGEKF DE F + H+ P LLSMANAGP+TNGSQFFIT   T  LDG+HVVFG+V+    VV  +E
Sbjct:    7 VFFDIAIGGQLAGRVAFRLYSDLVPKTAENFRALCTGEKGLGQSGKPLWYKGSAFHRVIKGFMCQGGDFTAGNGTGGESIYGEKFEDEGFPVHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHVVFGEVIKGRSVVRTIE 151          
The following BLAST results are available for this feature:
BLAST of CF832446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIA_HYLLE1.628e-4360.81Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA1.628e-4360.81Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN1.628e-4360.81Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO1.628e-4360.81Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]
PPIA_CERAE1.628e-4360.81Peptidyl-prolyl cis-trans isomerase A OS=Cercopith... [more]
PPIA_BOVIN1.628e-4360.81Peptidyl-prolyl cis-trans isomerase A OS=Bos tauru... [more]
PPID_DICDI2.778e-4360.40Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]
PPIA_RAT2.778e-4360.81Peptidyl-prolyl cis-trans isomerase A OS=Rattus no... [more]
PPIA_CRIGR2.778e-4360.81Peptidyl-prolyl cis-trans isomerase A OS=Cricetulu... [more]
PPID_AMAMU4.738e-4360.00Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832446 ID=CF832446; Name=CF832446; organism=Citrus sinensis; type=EST; length=599bp
GCCGGTGACTGCAGAATGAGAAACAACGAAGTGATATATGGCTTCAACAA
ATTTGCTTCCACTCACGATGCTATGGGCTGTTATCCTGTTGGCCACTTTC
TCTATAATTCTGGCGAAAAAATCGGATCAGAATTTGAAAGAAATCACAAA
CAAAGTTGACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTG
TAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGA
GCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCA
CTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAG
GAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGA
GAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCT
TTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCA
TTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGA
AAGGTGCTATCGGTGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGA
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