CF832458

Overview
NameCF832458
Unique NameCF832458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:545..1095. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.148e-42
Identity = 77/111 (69.37%), Postives = 93/111 (83.78%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH DEEV+YFPSR+D  RHAE+ PIP  V+TG REK  I+KENNF+Q GERYRS+ P RQ+RFL RW+ AL DPR+THE+R IW+SYWSQ D SLGQKLASRLN++P++
Sbjct:  382 NFMHRDEEVNYFPSRFDAARHAEKVPIPPRVLTGCREKCVIDKENNFQQAGERYRSFDPARQDRFLQRWVDALSDPRITHELRGIWISYWSQCDASLGQKLASRLNLKPNM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 5.699e-42
Identity = 75/111 (67.57%), Postives = 92/111 (82.88%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            N  H DEEVDY PSR+DP R AE+YPIPS V+ GRR    I KENNFKQ GERYRSW PDRQ+R++N+W+++L DPRVTHE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  382 NMTHRDEEVDYLPSRFDPCRPAEQYPIPSCVLNGRRTNCVIPKENNFKQAGERYRSWEPDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 9.721e-42
Identity = 77/111 (69.37%), Postives = 93/111 (83.78%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NF+H DEEV+YFPSR DPTRHAE+ P+P  V++G REK  I+KENNFKQ GERYRS+ P RQ+RFL RW+ AL D RVTHE++SIWVSYWSQ D SLGQKLASRL ++P++
Sbjct:  382 NFIHRDEEVNYFPSRVDPTRHAEKDPMPPRVLSGCREKCIIDKENNFKQAGERYRSFDPARQDRFLQRWVDALTDARVTHEIQSIWVSYWSQCDASLGQKLASRLKIKPNM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA1_MAIZE (Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.828e-41
Identity = 76/111 (68.47%), Postives = 91/111 (81.98%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH DEEV+YFPSR+DP RHAE+ PIP  V+T  REK  I+KENNFKQ GERYRS+ P RQ+RF+ RW+ AL  PRVTHE R+IW+SYWSQ D +LGQKL SRLN++PS+
Sbjct:  382 NFMHRDEEVNYFPSRFDPARHAEKVPIPPRVLTRCREKCIIQKENNFKQAGERYRSFDPARQDRFIQRWVDALTHPRVTHEHRTIWISYWSQCDAALGQKLPSRLNLKPSM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.833e-40
Identity = 73/111 (65.77%), Postives = 91/111 (81.98%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            N  H DEEVDYFPSR+DP R AE+YPIP+ V+ GRR    I KENN KQ GERYRSW  DRQ+R++N+W+++L DPRVTHE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  382 NMTHRDEEVDYFPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNSKQAGERYRSWESDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.334e-40
Identity = 72/111 (64.86%), Postives = 90/111 (81.08%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            N  H DEEVDY PSR+DP R AE+YPIP+ V+ GRR    I KENNFKQ GERYRSW  DRQ+R++ +W+++L DPRVTHE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  382 NMTHRDEEVDYLPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNFKQAGERYRSWESDRQDRYITKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSJ (Catalase isozyme A OS=Oryza sativa subsp. japonica GN=CATA PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.098e-36
Identity = 70/111 (63.06%), Postives = 87/111 (78.38%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH DEEVDY+PSR+ P RHA   PI    + GRR+KA I K+N+FKQPGERYRSWAPDRQERF+ R+   L  P+V+ E+R+IWV+Y SQ D SLG K+A+RLNV+PS+
Sbjct:  382 NFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSI (Catalase isozyme A OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.098e-36
Identity = 70/111 (63.06%), Postives = 87/111 (78.38%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH DEEVDY+PSR+ P RHA   PI    + GRR+KA I K+N+FKQPGERYRSWAPDRQERF+ R+   L  P+V+ E+R+IWV+Y SQ D SLG K+A+RLNV+PS+
Sbjct:  382 NFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.971e-36
Identity = 67/113 (59.29%), Postives = 90/113 (79.65%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAE--RYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH DEEVDY+PSR+ P RHAE   +P+P+  + G+REK  I+KEN+F QPGERYRSWAPDRQ+RF+ R+  AL  P+V+HE+R IW+ + S+ D+S G K+A+RLNV+PS+
Sbjct:  382 NFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVRRFSDALAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 494          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.836e-33
Identity = 65/113 (57.52%), Postives = 88/113 (77.88%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAE--RYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH DEEVDY+PSR+ P RHAE   +P+P+  + G+REK  I+KEN+F QPGERYRSWAPDRQ+RF+    + L  P+V+HE+R IW+ + S+ D+S G K+A+RLNV+PS+
Sbjct:  381 NFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFV-ALRRRLAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 492          
The following BLAST results are available for this feature:
BLAST of CF832458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA2_ORYSJ1.148e-4269.37Catalase isozyme B OS=Oryza sativa subsp. japonica... [more]
CATA1_SOLLC5.699e-4267.57Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]
CATA2_WHEAT9.721e-4269.37Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1[more]
CATA1_MAIZE2.828e-4168.47Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1[more]
CATA1_SOLTU1.833e-4065.77Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]
CATA2_SOLTU5.334e-4064.86Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_ORYSJ2.098e-3663.06Catalase isozyme A OS=Oryza sativa subsp. japonica... [more]
CATA1_ORYSI2.098e-3663.06Catalase isozyme A OS=Oryza sativa subsp. indica P... [more]
CATA2_HORVU7.971e-3659.29Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA_SECCE4.836e-3357.52Catalase OS=Secale cereale PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832458 ID=CF832458; Name=CF832458; organism=Citrus sinensis; type=EST; length=551bp
TGAATTTCATGCACTTGGATGAGGAGGTCGATTACTTTCCTTCGAGGTAT
GATCCTACTCGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTAC
AGGAAGGCGTGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGC
CTGGAGAGAGATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTCCTT
AATCGATGGATTAAGGCTTTATGTGACCCACGTGTCACCCATGAGGTTCG
CAGCATATGGGTCTCTTACTGGTCTCAGGCCGACAGATCTCTGGGTCAGA
AGCTAGCTTCTCGTCTCAATGTGAGGCCAAGCATTTGAAGGTGTCACTTG
AACTGGAACACTGGATGCTTTTGACTTGCCAAGAGTGAGCAAGGAGTGAA
CACCAAGGGTGCAGCTATGTGAAGAATTTCGATCCTATGTTTGCTGTTGT
ATATTGTAATATAGAAAATAAACTTGCATGTTATGTGACTCTTTTCCTGT
TGTTTCAATTAATAAAAGTCTGTTTTATGAAGTTCAAAAAAAAAAAAAAA
A
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