CF832465

Overview
NameCF832465
Unique NameCF832465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.246e-41
Identity = 75/105 (71.43%), Postives = 85/105 (80.95%), Query Frame = -2
Query:  520 CEKMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 834
            CEK    KG WT EED  L+ YI+ +G G WR+LPK AGLLRCGKSCRLRWINYLRPD+KRGNFT EE++ II LH +LGN+WS IA RLPGRTDNEIKN W+TH
Sbjct:    7 CEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTH 111          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB1_HORVU (Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.776e-41
Identity = 79/135 (58.52%), Postives = 94/135 (69.63%), Query Frame = -2
Query:  430 CEKMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHXXXXXXXXXXQEPVINNHSNANHVTARSEI 834
            CEK    KG WT EED  L  YI+ +G G WR+LPK AGLLRCGKSCRLRWINYLRPD+KRGNF+ EE++ II LH +LGN+WS IA RLPGRTDNEIKN W+TH           +PV +   N++H  +   I
Sbjct:    7 CEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTH-IRRKLTSRGIDPVTHRAINSDHAASNITI 140          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.626e-41
Identity = 75/105 (71.43%), Postives = 85/105 (80.95%), Query Frame = -2
Query:  520 CEKMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 834
            CEK    KG WT EED  LI+YI+ +G G WR+LP+ AGL RCGKSCRLRWINYLRPD+KRGNFT EE+D II LH +LGN+WS IA RLPGRTDNEIKN W+TH
Sbjct:    7 CEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINYLRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTH 111          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 73/105 (69.52%), Postives = 87/105 (82.86%), Query Frame = -2
Query:  520 CEKMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 834
            C+K+G+KKGPWTPEED IL++YIQ +G GNWRA+P   GLLRC KSCRLRW NYLRP IKRG+FT  EE  II+L  +LGNRW+AIA+ LP RTDN+IKN W+TH
Sbjct:    7 CDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAIPSNTGLLRCSKSCRLRWTNYLRPGIKRGDFTEHEEKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTH 111          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.561e-39
Identity = 71/101 (70.30%), Postives = 81/101 (80.20%), Query Frame = -2
Query:  520 GLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 822
            G+KKGPW PEED  L  YI   G+GNWR+LPK AGL RCGKSCRLRW+NYLRPDI+RG F+  EE TI+ LH +LGN+WS IA  LPGRTDNEIKN W+TH
Sbjct:   12 GVKKGPWLPEEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMNYLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTH 112          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens GN=PP2 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.561e-39
Identity = 72/104 (69.23%), Postives = 86/104 (82.69%), Query Frame = -2
Query:  523 CEKMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 834
            CEK+GL++GPWT EEDQ L+++I   G   WRA+PK AGLLRCGKSCRLRW NYLRPD+KRG F+  EE+ I++LH  LGNRWS IAA+LPGRTDNEIKN W+T
Sbjct:    7 CEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNYLRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNT 110          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.290e-38
Identity = 71/104 (68.27%), Postives = 84/104 (80.77%), Query Frame = -2
Query:  523 CEKMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 834
            C K  L+KG W+PEED+ L+NYI  +GHG W ++PK AGL RCGKSCRLRWINYLRPD+KRG F+++EE  II LH  LGNRWS IA RLPGRTDNEIKN W++
Sbjct:    7 CFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNS 110          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.873e-38
Identity = 72/105 (68.57%), Postives = 84/105 (80.00%), Query Frame = -2
Query:  520 CEKMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 834
            C+K+G+KKGPWT EED+ LI++I   G   WRA+PK AGL RCGKSCRLRW NYLRPD+KRG  +  EE  +I+LH  LGNRWS IAARLPGRTDNEIKN W+TH
Sbjct:    7 CDKLGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCGKSCRLRWTNYLRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTH 111          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYBC_MAIZE (Anthocyanin regulatory C1 protein OS=Zea mays GN=C1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.432e-37
Identity = 66/104 (63.46%), Postives = 83/104 (79.81%), Query Frame = -2
Query:  523 CEKMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 834
            C K G+K+G WT +ED  L  Y++ +G G WR +P++AGL RCGKSCRLRW+NYLRP+I+RGN + +EED II LH +LGNRWS IA RLPGRTDNEIKN W++
Sbjct:    7 CAKEGVKRGAWTSKEDDALAAYVKAHGEGKWREVPQKAGLRRCGKSCRLRWLNYLRPNIRRGNISYDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNS 110          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.418e-37
Identity = 64/99 (64.65%), Postives = 83/99 (83.84%), Query Frame = -2
Query:  520 KKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 816
            KKG WT EED+IL++Y++ +G G+W  + K+ GL RCGKSCRLRW+NYL P++KRGNFT +EED II LH++LGNRWS IA R+PGRTDN++KN W+TH
Sbjct:   17 KKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTH 115          
The following BLAST results are available for this feature:
BLAST of CF832465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
MYB08_ANTMA1.246e-4171.43Myb-related protein 308 OS=Antirrhinum majus GN=MY... [more]
MYB1_HORVU2.776e-4158.52Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1... [more]
MYB32_ARATH3.626e-4171.43Transcription factor MYB32 OS=Arabidopsis thaliana... [more]
MYB06_ANTMA8.078e-4169.52Myb-related protein 306 OS=Antirrhinum majus GN=MY... [more]
MYB39_ARATH7.561e-3970.30Transcription factor MYB39 OS=Arabidopsis thaliana... [more]
MYB2_PHYPA7.561e-3969.23Myb-related protein Pp2 OS=Physcomitrella patens G... [more]
MYB86_ARATH1.290e-3868.27Transcription factor MYB86 OS=Arabidopsis thaliana... [more]
ODO1_PETHY2.873e-3868.57Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 S... [more]
MYBC_MAIZE2.432e-3763.46Anthocyanin regulatory C1 protein OS=Zea mays GN=C... [more]
WER_ARATH5.418e-3764.65Transcription factor WER OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O11_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832465 ID=CF832465; Name=CF832465; organism=Citrus sinensis; type=EST; length=835bp
TTTTTTTTTTTTTTTTTCCACTAAGAAAGTGAAAATTAGTTACTTTAATC
ATAAAATTTCTGGTAACATTTCTGAGAAATCTCCAGCTTTGGTGAAAAGA
TTGAACCAAAAGTCGGTGTTATCACACAAAGTAGAACCAGGTCTAAAAGC
ATCGAGTGATGATTGAAATTCAACTATAGACAGTGGGTCGGCGCCTCCAA
CCGCTGAAAAACGATCATTGCTGTCCTCAATACTAATGCCCGAGTTCTCA
GCCGACAACACTTCCGTCCAAAAATTCTCATCTATTTCAACCAAGCTGTC
GTGATTGTTTTCGGACGACGACGGCTCTGTTTTCACGCAAGCGTTATTAG
CCGCGGAGGAGGTGACGGACGACATGTCGCTTGAAGTAGTAGTCGAGTCT
TGCCGATCGGGAGTACTGGCGCCGCTGCAAATCTCGGATCTCGCCGTAAC
ATGATTAGCGTTACTATGATTATTAATCACGGGCTCTTGTTGTTGCTTTT
GCTTGAGACGCTTTTTCAAGTGAGTGTGCCAAACATTTTTAATTTCGTTG
TCCGTTCTTCCCGGAAGTCTTGCTGCGATTGCTGACCATCTATTTCCGAG
CATTTCATGTAGGTTGATGATAGTGTCCTCTTCTTCTCTGGTGAAATTTC
CCCGTTTAATATCCGGCCGCAAGTAATTTATCCACCGGAGCCGGCAACTC
TTTCCACATCTTAATAAACCTGCTTGTTTGGGAAGTGCCCGCCAGTTGCC
ATGGCCATAAAGTTGAATGTAATTGATTAAAATTTGATCTTCTTCAGGAG
TCCATGGACCTTTCTTCAATCCCATCTTCTCGCAG
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