CF832465
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 8.952e-32 Identity = 86/245 (35.10%), Postives = 123/245 (50.20%), Query Frame = -2 Query: 100 KKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHXXXXXXXXXXQEPVINNHSNANHVTARSEICSG-AXXXXXXXXXXXXXXXXXXXXSAANNACVKTEPSSSENNH--DSLVEIDENFWTEVLSAE--NSGISIEDSNDRFS-AVGGADPLSIVEFQSSLDAFRPGSTLCDNTDFWFN 816 +KG W+PEED+ L ++I YGH W +P +AGL R GKSCRLRWINYLRP +KR + EEE+TI+ H LGN+WS IA LPGRTDNEIKN WH+H + +A ++ S S N + ++ S+ N+H S EI F++E LS+ ++ S E ++ + S A + LS E +D F + +N+++ N Sbjct: 11 RKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKKWLKSQSLQ-------DAKSISPPSSSSSSLVACGKRNPETLISNHVFSFQRLLENKSSSPSQESNGNNSHQCSSAPEIPRLFFSEWLSSSYPHTDYSSEFTDSKHSQAPNVEETLSAYEEMGDVDQFHYNEMMINNSNWTLN 248
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.527e-31 Identity = 58/104 (55.77%), Postives = 75/104 (72.12%), Query Frame = -2 Query: 520 EKMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 831 ++ G +KGPWT +ED +L+N++ L+G W + K +GL R GKSCRLRW+NYL P +KRG T +EE ++ LH GNRWS IA +LPGRTDNEIKN W TH Sbjct: 3 QEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTH 106
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 5.803e-31 Identity = 57/99 (57.58%), Postives = 72/99 (72.73%), Query Frame = -2 Query: 520 KKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 816 +KGPWT +ED +L+N++ L+G W + K +GL R GKSCRLRW+NYL P +KRG T +EE ++ LH GNRWS IA +LPGRTDNEIKN W TH Sbjct: 9 RKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTH 107
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.184e-29 Identity = 57/100 (57.00%), Postives = 70/100 (70.00%), Query Frame = -2 Query: 520 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 819 ++KGPWT +ED L+ ++L+G W + K +GL R GKSCRLRW+NYL P +KRG + EE I+ LH GNRWS IA RLPGRTDNEIKN W TH Sbjct: 8 IRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTH 107
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.093e-29 Identity = 57/100 (57.00%), Postives = 70/100 (70.00%), Query Frame = -2 Query: 520 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 819 ++KGPWT +ED L+ ++L+G W + K +GL R GKSCRLRW+NYL P +K G + +EE II LH GNRWS IA RLPGRTDNEIKN W TH Sbjct: 8 MRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTH 107
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 9.587e-26 Identity = 51/101 (50.50%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 526 KMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWH 828 K K W PEED+IL +Y+ YG W +PK+ GL SCR RW+N+L+P +K+G FT EEE ++ LH +LGN+WS +A PGRTDNEIKN W+ Sbjct: 13 KKTFTKSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWN 113
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB_XENLA (Myb protein OS=Xenopus laevis GN=myb PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.692e-22 Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = -2 Query: 523 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 819 L KGPWT EEDQ +I + YG W + K R GK CR RW N+L P++K+ ++T EE+ TI H+ LGNRW+ IA LPGRTDN IKN W++ Sbjct: 87 LIKGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNS 184
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB_AVIMB (Transforming protein Myb OS=Avian myeloblastosis virus GN=V-MYB PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.692e-22 Identity = 49/99 (49.49%), Postives = 65/99 (65.66%), Query Frame = -2 Query: 523 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 819 L KGPWT EEDQ +I ++Q YG W + K R GK CR RW N+L P++K+ ++T EE+ I H+ LGNRW+ IA LPGRTDN +KN W++ Sbjct: 19 LNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNS 116
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 2.210e-22 Identity = 48/99 (48.48%), Postives = 67/99 (67.68%), Query Frame = -2 Query: 523 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 819 L KGPWT EED+ +I ++ YG +W + KQ R GK CR RW N+L P++K+ ++T EE+ I H++LGNRW+ IA LPGRTDN +KN W++ Sbjct: 81 LVKGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRG-RMGKQCRERWHNHLNPEVKKSSWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNS 178 HSP 2 Score: 75.485 bits (184), Expect = 4.178e-13 Identity = 34/99 (34.34%), Postives = 56/99 (56.57%), Query Frame = -2 Query: 520 KGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNR-WSAIAARLPGRTDNEIKNVWHTH 813 K WTPEED+ L ++ +G G W+ + R + C+ RW+ L PD+ +G +T+EE++ +I L + G + W+ IA +L GR + + WH H Sbjct: 31 KVKWTPEEDETLKALVKKHGQGEWKTIASNLNN-RTEQQCQHRWLRVLHPDLVKGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRGRMGKQCRERWHNH 128
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYBA_MOUSE (Myb-related protein A OS=Mus musculus GN=Mybl1 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 2.210e-22 Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = -2 Query: 523 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 819 L KGPWT EEDQ +I +Q YG W + K R GK CR RW N+L P++K+ ++T EE+ I H+ LGNRW+ IA LPGRTDN IKN W++ Sbjct: 85 LIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNS 182 The following BLAST results are available for this feature:
BLAST of CF832465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832465 ID=CF832465; Name=CF832465; organism=Citrus sinensis; type=EST; length=835bpback to top |