CF832532
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26A_SCHPO (40S ribosomal protein S26-A OS=Schizosaccharomyces pombe GN=rps26a PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.681e-28 Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 280 MT KR N GRNKHGRGH KF+RC NC + PKDKAIKR+ +RN+VE AA+RD+ EA VY Y +PK+Y K+QYCVSCAIH+ Sbjct: 1 MTQKRRNCGRNKHGRGHTKFVRCINCSRAVPKDKAIKRWNIRNMVETAAIRDLSEASVYSEYAIPKIYVKLQYCVSCAIHA 81
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26L_HUMAN (Putative 40S ribosomal protein S26-like 1 OS=Homo sapiens GN=RPS26P11 PE=5 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.254e-26 Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 280 MT KR N K GRGHV+ IRC+NC +C P DKAIK+F++RNIVE AAVRD+ E V+D Y LPKLY K+ YCVSCAIHS Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVSCAIHS 81
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26_DICDI (40S ribosomal protein S26 OS=Dictyostelium discoideum GN=rps26 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.104e-25 Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD--GYTLPKLYAKMQYCVSCAIHSH 283 MT KR N GR+KHGRG V +IRC+NC +C PKDKA+KRF +R IVE AAV+D+ + V++ GY P+ Y K QYC+SCAIHSH Sbjct: 1 MTQKRRNHGRSKHGRGSVPYIRCTNCARCVPKDKAVKRFYIRPIVENAAVKDISDQGVFNVKGYKFPRTYVKSQYCISCAIHSH 84
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26B_YEAST (40S ribosomal protein S26-B OS=Saccharomyces cerevisiae GN=RPS26B PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.104e-25 Identity = 54/81 (66.67%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 280 M KR++ GRNK GRGHVK +RC NC K PKDKAIKR +RNIVE AAVRD+ EA VY Y LPK Y K+ YCVSCAIH+ Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHA 81
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26A_YEAST (40S ribosomal protein S26-A OS=Saccharomyces cerevisiae GN=RPS26A PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.104e-25 Identity = 54/81 (66.67%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 280 M KR++ GRNK GRGHVK +RC NC K PKDKAIKR +RNIVE AAVRD+ EA VY Y LPK Y K+ YCVSCAIH+ Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHA 81
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26_OXYNO (40S ribosomal protein S26 OS=Oxytricha nova GN=RPS26 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20 Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVY--DGYTLPKLYAKMQYCVSCAIHS 280 M KR N GRNK +GH +RC+NCG+ KDKAIKRF RN+V+ ++ RD+QE Y +T+PK+Y K+ YCVSCAIH+ Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYAQSDFTMPKIYVKLSYCVSCAIHA 83
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26_ENCCU (40S ribosomal protein S26 OS=Encephalitozoon cuniculi GN=RPS26 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.492e-16 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 50 RSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 280 R N GR K RG I+C CG PKDKAIKRF +++++EQA+ D+++A +YD + +P++ K Q+CVSCA H+ Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEVPRMGYKSQFCVSCACHA 78 The following BLAST results are available for this feature:
BLAST of CF832532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832532 ID=CF832532; Name=CF832532; organism=Citrus sinensis; type=EST; length=652bpback to top |