CF832535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_HAES2 (Ribosome-recycling factor OS=Haemophilus somnus (strain 2336) GN=frr PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.348e-33 Identity = 63/143 (44.06%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 + P++LD I+VEYYGSP L+ +A + D+ +L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V + E+GK+A+RN+RRDA + L K+K++SED + ++QK+TD ++KK+D I Sbjct: 32 AQPSLLDGIQVEYYGSPTPLRQLANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKIAIRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDTFVKKVDEI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_HAES1 (Ribosome-recycling factor OS=Haemophilus somnus (strain 129Pt) GN=frr PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.348e-33 Identity = 63/143 (44.06%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 + P++LD I+VEYYGSP L+ +A + D+ +L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V + E+GK+A+RN+RRDA + L K+K++SED + ++QK+TD ++KK+D I Sbjct: 32 AQPSLLDGIQVEYYGSPTPLRQLANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKIAIRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDTFVKKVDEI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_ERWCT (Ribosome-recycling factor OS=Erwinia carotovora subsp. atroseptica GN=frr PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.348e-33 Identity = 68/141 (48.23%), Postives = 102/141 (72.34%), Query Frame = -2 Query: 228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650 ++P++LD I VEYYGS L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE+G+++VRN+RRDA ++ L K+K +SED + D+QKLTD ++KK+D Sbjct: 32 ASPSILDGIHVEYYGSATPLRQLANVVVEDSRTLAISVFDRSLSPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRISVRNVRRDANDKFKALLKDKAISEDEERRAQDDVQKLTDNFIKKVD 172
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SHESH (Ribosome-recycling factor OS=Shewanella sediminis (strain HAW-EB3) GN=frr PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.067e-33 Identity = 67/143 (46.85%), Postives = 101/143 (70.63%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++LD I+V YYGS LK + ++ DS +L + +D + ++++EKAI+SSDLG+ P + G IR+ LP LT ERRK+L KVV +AE G++AVRN+RRDA + L+KEK+ +ED+V+ D+QK TD ++K ID I Sbjct: 32 AHPSLLDTIKVSYYGSMTPLKQVGNVSIEDSRTLAVNVFDSTMIQAVEKAIMSSDLGLNPMSAGATIRIPLPALTEERRKDLIKVVRAEAENGRIAVRNVRRDANSDVKSLEKEKECTEDDVRRTEDDVQKFTDAHIKLIDEI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SHEHH (Ribosome-recycling factor OS=Shewanella halifaxensis (strain HAW-EB4) GN=frr PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.067e-33 Identity = 65/143 (45.45%), Postives = 104/143 (72.73%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++LD I+V YYGS LK +A ++ D+ +L + +D++ + ++EKAI+SSDLG+ P + G IR+ LP LT ERRK+L KVV +AE G++A+RN+RRDA ++L+KEK+ +ED+V+ D+QKLTD ++K +D + Sbjct: 32 AHPSLLDTIQVPYYGSLTPLKQVASVSIGDARTLTVSVFDRTMIAAVEKAIMSSDLGLNPMSAGATIRIPLPALTEERRKDLIKVVRAEAENGRIAIRNVRRDANSNVKELEKEKECTEDDVRRSEDDVQKLTDAHIKLVDDV 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_ROSCS (Ribosome-recycling factor OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=frr PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.067e-33 Identity = 67/143 (46.85%), Postives = 104/143 (72.73%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++PA+++ + VE YG+ + L +A I P+ L+IQP+D +++K+I KAI++S+LG+TP +DG +IRL +PQLT RRKEL+K+V + EE KVA+RNIRR+AL+ L+ EK +SED + LQ+LTD Y++++D I Sbjct: 32 ASPALVEHLHVEAYGATLPLNQLATITVPEPRMLVIQPFDANTVKAISKAIMNSELGITPTDDGRLIRLAIPQLTEARRKELTKLVRARVEESKVALRNIRREALEDLRDLEHEKMISEDEHRRAQEKLQELTDRYVRELDHI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_PHOLL (Ribosome-recycling factor OS=Photorhabdus luminescens subsp. laumondii GN=frr PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.067e-33 Identity = 68/141 (48.23%), Postives = 103/141 (73.05%), Query Frame = -2 Query: 228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650 ++P++LD I VEYYG+P L+ +A + D+ +L I +D++ +IEKAI++SDLG+ P++ G IR+ LP LT ERRK+L KVV +AE+G+V+VRNIRRDA + L K+K++SED+ + D+QKLTD ++KK+D Sbjct: 32 ASPSLLDGIIVEYYGAPTPLRQLANVIAEDARTLAITVFDRTMTPAIEKAIMASDLGLNPSSAGTTIRVPLPPLTEERRKDLIKVVRSEAEQGRVSVRNIRRDANDKIKALLKDKEISEDDERRAQDDIQKLTDNFIKKVD 172
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_GEOMG (Ribosome-recycling factor OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=frr PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.067e-33 Identity = 64/139 (46.04%), Postives = 103/139 (74.10%), Query Frame = -2 Query: 222 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 638 +LD I+VEYYG+P L +A ++ P+ ++ IQP++ + IEKAI++++LG TP NDG+ IR++LP LT ERRKE+ K + K AE+ KVAVRNIRRD + + +KL+K+KK+SED++K ++Q +T+ ++ K++ + Sbjct: 36 LLDDIKVEYYGNPSPLSQVATLSVPEPRTITIQPWEAKLIPVIEKAIMNANLGFTPANDGKTIRISLPPLTEERRKEIVKTLKKMAEDTKVAVRNIRRDGIDSLKKLEKDKKISEDDLKRAEKEVQDVTNTFVAKVEEV 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_DESOH (Ribosome-recycling factor OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=frr PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.067e-33 Identity = 65/142 (45.77%), Postives = 107/142 (75.35%), Query Frame = -2 Query: 216 AMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 641 A+LD I V+YYG+P L +A ++ P+S ++IQP+D +++K +EKAI+ +++ +TP+NDG+VIRL++P LT +RRKE++K V + AEE KVA+RNIRRDA + ++++K+ +SED +QK+TD Y+++ID ++K Sbjct: 35 ALLDGIVVDYYGTPTPLNQLASLSVPESRLIVIQPWDATAIKDVEKAILQANIDLTPSNDGKVIRLSIPPLTEDRRKEIAKRVNQMAEEHKVAMRNIRRDANETLKQMKKDGDISEDESFAGKDKVQKVTDGYIERIDEVFK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_YERPY (Ribosome-recycling factor OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 68/142 (47.89%), Postives = 104/142 (73.24%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I+VEYYG+ L+ +A I DS +L + +D+S ++EKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE+G+V++RN+RRDA + L K+K++SED + D+QKLTD Y+KK+D+ Sbjct: 32 ASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNVRRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKKVDA 173 The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832535 ID=CF832535; Name=CF832535; organism=Citrus sinensis; type=EST; length=651bpback to top |