CF832535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_YERPS (Ribosome-recycling factor OS=Yersinia pseudotuberculosis GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 68/142 (47.89%), Postives = 104/142 (73.24%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I+VEYYG+ L+ +A I DS +L + +D+S ++EKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE+G+V++RN+RRDA + L K+K++SED + D+QKLTD Y+KK+D+ Sbjct: 32 ASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNVRRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_YERPP (Ribosome-recycling factor OS=Yersinia pestis (strain Pestoides F) GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 68/142 (47.89%), Postives = 104/142 (73.24%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I+VEYYG+ L+ +A I DS +L + +D+S ++EKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE+G+V++RN+RRDA + L K+K++SED + D+QKLTD Y+KK+D+ Sbjct: 32 ASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNVRRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_YERPN (Ribosome-recycling factor OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 68/142 (47.89%), Postives = 104/142 (73.24%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I+VEYYG+ L+ +A I DS +L + +D+S ++EKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE+G+V++RN+RRDA + L K+K++SED + D+QKLTD Y+KK+D+ Sbjct: 32 ASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNVRRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_YERPG (Ribosome-recycling factor OS=Yersinia pestis bv. Antiqua (strain Angola) GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 68/142 (47.89%), Postives = 104/142 (73.24%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I+VEYYG+ L+ +A I DS +L + +D+S ++EKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE+G+V++RN+RRDA + L K+K++SED + D+QKLTD Y+KK+D+ Sbjct: 32 ASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNVRRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_YERPE (Ribosome-recycling factor OS=Yersinia pestis GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 68/142 (47.89%), Postives = 104/142 (73.24%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I+VEYYG+ L+ +A I DS +L + +D+S ++EKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE+G+V++RN+RRDA + L K+K++SED + D+QKLTD Y+KK+D+ Sbjct: 32 ASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNVRRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_YERPB (Ribosome-recycling factor OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 68/142 (47.89%), Postives = 104/142 (73.24%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I+VEYYG+ L+ +A I DS +L + +D+S ++EKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE+G+V++RN+RRDA + L K+K++SED + D+QKLTD Y+KK+D+ Sbjct: 32 ASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNVRRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_YERPA (Ribosome-recycling factor OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 68/142 (47.89%), Postives = 104/142 (73.24%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I+VEYYG+ L+ +A I DS +L + +D+S ++EKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE+G+V++RN+RRDA + L K+K++SED + D+QKLTD Y+KK+D+ Sbjct: 32 ASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNVRRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_YERP3 (Ribosome-recycling factor OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 68/142 (47.89%), Postives = 104/142 (73.24%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I+VEYYG+ L+ +A I DS +L + +D+S ++EKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE+G+V++RN+RRDA + L K+K++SED + D+QKLTD Y+KK+D+ Sbjct: 32 ASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNVRRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SHESA (Ribosome-recycling factor OS=Shewanella sp. (strain ANA-3) GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 63/143 (44.06%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++LD I+V YYG+ L +A + D+ +L + +D+S+++++EKAI+SSDLG+ P + G +R+ LP LT ERRK+ KVV +AE G+VA+RN+RRDA+ +KL+K K+ +ED+V+ ++QK TD ++KK+D I Sbjct: 32 AHPSLLDSIQVSYYGTMTPLNQVANVGIEDARTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRVAIRNVRRDAISEVKKLEKAKECTEDDVRRFEDEVQKFTDAHIKKVDEI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SHEPW (Ribosome-recycling factor OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 67/143 (46.85%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++LD I+V YYGS LK +A ++ D+ +L + +D++ + ++EKAI+SSDLG+ P + G IR+ LP LT ERRK+L KVV +AE G++AVRN+RRDA + L+KEK+ +ED+V+ ++QK TD ++KKID I Sbjct: 32 AHPSLLDTIQVPYYGSLTPLKQVASVSIGDARTLNVSVFDRTMIAAVEKAIMSSDLGLNPMSAGATIRIPLPALTEERRKDLIKVVRAEAENGRIAVRNVRRDANSDVKALEKEKECTEDDVRRTEDEVQKFTDAHIKKIDEI 174 The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832535 ID=CF832535; Name=CF832535; organism=Citrus sinensis; type=EST; length=651bpback to top |