CF832535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SHEON (Ribosome-recycling factor OS=Shewanella oneidensis GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 63/143 (44.06%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++LD I+V YYG+ L +A + D+ +L + +D+S+++++EKAI+SSDLG+ P + G +R+ LP LT ERRK+ KVV +AE G+VA+RN+RRDA+ +KL+K K+ +ED+V+ ++QK TD ++KK+D I Sbjct: 32 AHPSLLDSIQVSYYGTMTPLNQVANVGVEDARTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRVAIRNVRRDAISDVKKLEKAKECTEDDVRRFEDEVQKFTDAHIKKVDEI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LEPIN (Ribosome-recycling factor OS=Leptospira interrogans GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 66/143 (46.15%), Postives = 101/143 (70.63%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +NP++++ I V+YYG+ + + I+ P+ L+I PYDK +K IEKAI +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KVA+RNIRRDA++ +K + +S+D +K + +QK+TD Y+ KI ++ Sbjct: 33 ANPSLVEDIRVDYYGNQTPINQLGNISVPEPRMLVISPYDKGIMKDIEKAIQTSGLGLQPTNDGVVIRIVIPELTGERRKELAKVVKSKSEEKKVAIRNIRRDAMEDLKK--HTEGMSQDEIKSVQDQIQKITDSYIDKISAL 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LEPIC (Ribosome-recycling factor OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 66/143 (46.15%), Postives = 101/143 (70.63%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +NP++++ I V+YYG+ + + I+ P+ L+I PYDK +K IEKAI +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KVA+RNIRRDA++ +K + +S+D +K + +QK+TD Y+ KI ++ Sbjct: 33 ANPSLVEDIRVDYYGNQTPINQLGNISVPEPRMLVISPYDKGIMKDIEKAIQTSGLGLQPTNDGVVIRIVIPELTGERRKELAKVVKSKSEEKKVAIRNIRRDAMEDLKK--HTEGMSQDEIKSVQDQIQKITDSYIDKISAL 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_HAEDU (Ribosome-recycling factor OS=Haemophilus ducreyi GN=frr PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.006e-33 Identity = 62/143 (43.36%), Postives = 102/143 (71.33%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 + P++LD I+VEYYGS L+ +A + D+ +L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V + E+GK+A+RN+RRDA + L K+K++SED + ++QK+TD Y+KK+D + Sbjct: 32 AQPSLLDGIQVEYYGSATPLRQVANVVAEDARTLAVNVFDRSLISAVEKAILTSDLGLNPSSAGATIRVPLPALTEERRRDLIKIVKNEGEQGKIAIRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDGYVKKVDEV 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_YERE8 (Ribosome-recycling factor OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=frr PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.231e-33 Identity = 67/142 (47.18%), Postives = 105/142 (73.94%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I+VEYYG+ L+ +A I DS +L + +D+S ++EKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE+G+V++RN+RRDA + + L K+K++SED + D+QKLTD ++KK+D+ Sbjct: 32 ASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNVRRDANEKVKALLKDKEISEDEDRRSQDDIQKLTDAFIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_XANCP (Ribosome-recycling factor OS=Xanthomonas campestris pv. campestris GN=frr PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.231e-33 Identity = 70/145 (48.28%), Postives = 100/145 (68.97%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 ++PA+LD I+V+ YG+ L +A I+ + SL+I +DK +K +EKAI +SDLG+TP G VIRL LP LT ERRKELSK V + E+ KVA+RNIRRDA + + L K+K+++ED + D+QKLTD+ +K +D + K Sbjct: 32 ASPALLDNIKVKAYGTDTPLNQVASISVSEGRSLVISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDAKVAIRNIRRDANQQVKDLLKDKQVTEDEARGAEDDIQKLTDKAIKDVDEVVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_XANCB (Ribosome-recycling factor OS=Xanthomonas campestris pv. campestris (strain B100) GN=frr PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.231e-33 Identity = 70/145 (48.28%), Postives = 100/145 (68.97%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 ++PA+LD I+V+ YG+ L +A I+ + SL+I +DK +K +EKAI +SDLG+TP G VIRL LP LT ERRKELSK V + E+ KVA+RNIRRDA + + L K+K+++ED + D+QKLTD+ +K +D + K Sbjct: 32 ASPALLDNIKVKAYGTDTPLNQVASISVSEGRSLVISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDAKVAIRNIRRDANQQVKDLLKDKQVTEDEARGAEDDIQKLTDKAIKDVDEVVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_XANC8 (Ribosome-recycling factor OS=Xanthomonas campestris pv. campestris (strain 8004) GN=frr PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.231e-33 Identity = 70/145 (48.28%), Postives = 100/145 (68.97%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 ++PA+LD I+V+ YG+ L +A I+ + SL+I +DK +K +EKAI +SDLG+TP G VIRL LP LT ERRKELSK V + E+ KVA+RNIRRDA + + L K+K+++ED + D+QKLTD+ +K +D + K Sbjct: 32 ASPALLDNIKVKAYGTDTPLNQVASISVSEGRSLVISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDAKVAIRNIRRDANQQVKDLLKDKQVTEDEARGAEDDIQKLTDKAIKDVDEVVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STACT (Ribosome-recycling factor OS=Staphylococcus carnosus (strain TM300) GN=frr PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.231e-33 Identity = 66/146 (45.21%), Postives = 105/146 (71.92%), Query Frame = -2 Query: 213 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 650 +N +L ++V+YYG+P ++ +A IN P+ L++ PYDK+SL IE+AI +++LG+ P++DGEVIR+ +P LT ERRKEL K V K E KV++RNIRRD+ +K +KE +SED ++ + D+QK+TDE +K++D + ++ Sbjct: 31 ANSNLLAGVKVDYYGAPTPVQQLASINVPEPRLLVVSPYDKTSLSDIERAINAANLGVNPSSDGEVIRIMVPALTEERRKELVKDVKKMGENAKVSIRNIRRDSNDDLKKDEKEGVISEDELRTGTDDVQKITDESIKEVDKVLEE 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SHESR (Ribosome-recycling factor OS=Shewanella sp. (strain MR-7) GN=frr PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.231e-33 Identity = 63/143 (44.06%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++LD I+V YYG+ L +A + D+ +L + +D+S+++++EKAI+SSDLG+ P + G +R+ LP LT ERRK+ KVV +AE G+VA+RN+RRDA+ +KL+K K+ +ED+V+ ++QK TD ++KK+D I Sbjct: 32 AHPSLLDSIQVSYYGTMTPLNQVANVGIEDARTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRVAIRNVRRDAISDVKKLEKAKECTEDDVRRFEDEVQKFTDAHIKKVDEI 174 The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832535 ID=CF832535; Name=CF832535; organism=Citrus sinensis; type=EST; length=651bpback to top |