CF832535

Overview
NameCF832535
Unique NameCF832535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2930 contig Csv1_Contig2930:415..1065. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STRPG (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=frr PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.054e-38
Identity = 74/141 (52.48%), Postives = 105/141 (74.47%), Query Frame = -2 
Query:  228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650
            +N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L  D+QK TD+ +K+ID
Sbjct:   32 ANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEID 172
[Close]
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STRPF (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=frr PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.054e-38
Identity = 74/141 (52.48%), Postives = 105/141 (74.47%), Query Frame = -2 
Query:  228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650
            +N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L  D+QK TD+ +K+ID
Sbjct:   32 ANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEID 172
[Close]
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STRPD (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=frr PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.054e-38
Identity = 74/141 (52.48%), Postives = 105/141 (74.47%), Query Frame = -2 
Query:  228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650
            +N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L  D+QK TD+ +K+ID
Sbjct:   32 ANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEID 172
[Close]
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STRPC (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=frr PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.054e-38
Identity = 74/141 (52.48%), Postives = 105/141 (74.47%), Query Frame = -2 
Query:  228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650
            +N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L  D+QK TD+ +K+ID
Sbjct:   32 ANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEID 172
[Close]
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STRPB (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=frr PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.054e-38
Identity = 74/141 (52.48%), Postives = 105/141 (74.47%), Query Frame = -2 
Query:  228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650
            +N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L  D+QK TD+ +K+ID
Sbjct:   32 ANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEID 172
[Close]
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STRP8 (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M18 GN=frr PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.054e-38
Identity = 74/141 (52.48%), Postives = 105/141 (74.47%), Query Frame = -2 
Query:  228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650
            +N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L  D+QK TD+ +K+ID
Sbjct:   32 ANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEID 172
[Close]
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STRP6 (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M6 GN=frr PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.054e-38
Identity = 74/141 (52.48%), Postives = 105/141 (74.47%), Query Frame = -2 
Query:  228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650
            +N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L  D+QK TD+ +K+ID
Sbjct:   32 ANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEID 172
[Close]
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STRP3 (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M3 GN=frr PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.054e-38
Identity = 74/141 (52.48%), Postives = 105/141 (74.47%), Query Frame = -2 
Query:  228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650
            +N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L  D+QK TD+ +K+ID
Sbjct:   32 ANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEID 172
[Close]
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STRP1 (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M1 GN=frr PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.054e-38
Identity = 74/141 (52.48%), Postives = 105/141 (74.47%), Query Frame = -2 
Query:  228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650
            +N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L  D+QK TD+ +K+ID
Sbjct:   32 ANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEID 172
[Close]
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STREM (Ribosome-recycling factor OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=frr PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.054e-38
Identity = 75/141 (53.19%), Postives = 105/141 (74.47%), Query Frame = -2 
Query:  228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650
            +N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  KV++RNIRRDA+   +K +K K+++ED +K L  D+QK TDE +K+ID
Sbjct:   32 ANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGETAKVSIRNIRRDAMDEAKKQEKAKEITEDELKALEKDIQKATDEAVKEID 172
The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RRF_STRPG7.054e-3852.48Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPF7.054e-3852.48Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPD7.054e-3852.48Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPC7.054e-3852.48Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPB7.054e-3852.48Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRP87.054e-3852.48Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRP67.054e-3852.48Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRP37.054e-3852.48Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRP17.054e-3852.48Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STREM7.054e-3853.19Ribosome-recycling factor OS=Streptococcus equi su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02A06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832535 ID=CF832535; Name=CF832535; organism=Citrus sinensis; type=EST; length=651bp
TTTTTTTTTTTTTTTTTACAAAGAGTCTAGAATAACTAATTTCCCCCTTT
CATTTCATAACAAAATATCCACCCGTGTCTCCCATTATTATCAAAAAATG
CCATTCTATGGGCAAACCAAAAAATAAAGAGTGCATTCTGAGATTCACTA
GAGAGCTCACCCTTACATTTGTGTGTAAACAATCATTAAACCTTCAACAA
CTCCTTCTCTTTCTGTTTGTAGATGCTATCAATCTTCTTCATATACTCAT
CTGTTAGTTTCTGTAAATCACTTGACAAGTCCTTCACATTGTCTTCAGAG
AGCTTCTTCTCCTTCTGAAGTTTTTCATAAGCTTTTAACGCATCTCTTCT
TATATTCCTAACTGCCACCTTCCCTTCTTCAGCCTGTTTGGCCACAACCT
TTGACAGTTCCTTCCTCCTTTCGGATGTCAATTGAGGAAGGGTTAACCGT
ATGACTTCACCATCATTGTTTGGGGTCATGCCAAGATCAGAGCTCACTAT
GGCCTTCTCTATAGACTTTAAGCTGGATTTGTCATATGGTTGAATCAATA
GAGAACTTGAATCAGGGGTATTGATTTGAGCTATGCTCTTCAAACTTACT
GGGCTTCCATAGTATTCCACCTCAATCTTATCTAGCATAGCTGGATTCGA
T
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